MitoEAGLE blood cells 1

From Bioblast
Jump to: navigation, search


e-COST MitoEAGLE
e-COST MitoEAGLE countries
MitoGlobal
MitoEAGLE
News and Events         About COST Action MitoEAGLE         Working Groups         MiP/MitoEAGLE Conference, WG and MC Meeting 2019 Belgrade RS         MitoEAGLE Preprint States and rates         Short-Term Scientific Missions         Inclusiveness Target Countries         Management Committee         Members    


MiPsociety
COST Action CA15203 MitoEAGLE
Evolution-Age-Gender-Lifestyle-Environment: mitochondrial fitness mapping


 

MitoEAGLE blood cells 1


Publications in the MiPMap
MitoEAGLE blood cells group (2018) An interlaboratory guide through procedures for mitochondrial respiratory studies with intact and permeabilized peripheral blood mononuclear cells and platelets. - Updated: 2018-02-23

» MitoEAGLE blood cells group (WG 4)

Aasander Frostner E, Calabria E, Chamkha I, Chang SC, Danila MD, Duicu OM, Garcia-Souza LF, Gnaiger E, Keppner G, Labieniec-Watala M, Lelcu T, Michalak S, Pavlovic K, Pelnena D, Piel S, Rybacka-Mossakowska J, Siewiera K, Silaidos C, Sumbalova Z, Swiniuch D, Volani C, Vujacic-Mirski K, Watala C (2018) MitoEAGLE

Abstract:
Fig. 1. Workflow and topics. SUIT protocols for measurement of respiration in intact cells (viable cells, vce) and permeabilized cells (pce).
Version beta 01
  1. The evaluation of mitochondrial function remains crucial for the diagnosis of a spectrum of human pathologies. Peripheral blood provides an easily accessible source of primary human cells. However, mitochondrial respiratory studies in blood cells still require standardization. The procedures applied in bioenergetic assessments involve multiple steps in the pre-analytical, analytical and data analysis phase. The aim of this review is to summarize methods of preparing and applying peripheral blood mononuclear cells (PBMC) and platelets (PLT) for mitochondrial respiratory studies. For this purpose we report original data from several laboratories and literature data.
  2. We do not present results on patients, but characterize healthy control groups. Exclusion criteria in the pre-analytical phase are related to smoking, alcohol intake, BMI, lifestyle interventions, and medications. In pathophysiological studies, subjects have to be matched with controls for sex, age and genetic background. Time of sampling, fasting and resting state require standardization.
  3. Anticoagulants are used for whole blood sampling (e.g., K-EDTA, lithium heparin, sodium citrate). Protocols are optimized on the basis of yield, cell fraction purity and respiratory function.
  4. The time and temperature during transport and storage of whole blood has to be monitored carefully and evaluated in terms of final outcome. Characterization of whole blood provides rigorous exclusion criteria for controls.
  5. Separation procedures depend on the type of cells harvested for respirometric studies (PLT, PBMC, or both). Media, centrifugation conditions, cell counting and cell viability methods are evaluated. Results on purity of preparations (e.g., PLT contamination in PBMC fraction, purity of PLT fraction), recovery and yield of cells are compared in studies using a variety of cell separation methods.
  6. Information is lacking on the effect of storage and conditions during processing of isolated cell types before respirometry. Temperature, media, antibiotics, proteinase inhibitors cocktail, density of cells during storage, tilting of cell fraction might significantly affect the measurements.
  7. Specific protocols are used for respiration assessments in intact and permeabilized. The type of medium used for respirometry (MiR05, RPMI, plasma) needs further evaluation.
  8. Normalization is important to interpret and compare the results of respiratory studies. It should include data on contamination of PBMC with PLT, cell viability (e.g., succinate test), flux control ratios, total protein concentration, citrate synthase activity. Some other markers, like clusters of differentiation specific for leukocytes and platelets can be taken into consideration.
  9. Finally, we summarize emerging recommendations for mitochondrial respiratory studies in intact and permeabilized PBMC and PLT towards building a data base of healthy subjects that can be used as controls in clinical studies.


Manuscript table and figure blocks

  • Section: Workflow # and Title
  • Summary: Aims [1] and recommendations
  • Specify study group [2], consider sensitive data
  • Methods
  • Describe results shown in table and figure, as median and inter-quartile range; provide text with full information
  • Discussion
  • Conclusions, provide full information
  • References
(1) Define the aim, the question:
  • Scientific: focus on accuracy of best physiological data, separate isolation proocols for PBMC and PLT, if necessary.
  • Diagnostic: discriminative tool relying on reproducibility, practicability and minimum available blood volume; if necessary, accept compromises when PBMC and PLT should be analyzed from the same blood sample.
(2) Include patient data solely for messages on methods (comparison of the effect of anticoagulants, ..); patient data can be reduced to showing fractional effects of methodological variations.
Fig. 2. Dataflow from cohort design to respirometric SUIT protocols and technical repeats. For the meaning of numbers in circles, see Figure 1.

Templates for PBMC and PLT data base

  • 2018-12-18 An updated template for the PBMC and PLT data base is in preparation (Luiz, Caro, Erich).
    • Luiz will be responsible for collecting and merging the data sheets based on previous templates, summarizing all data in the new template.
    • This will be the basis of the WG4 Task Group meeting in March 2019. We have to fix the dates.
» MitoEAGLE template PLT final.xlsx
» MitoEAGLE template PBMC final.xlsx
  • We will collect and analyze all data, in preparation of a database for Open Access in conjunction with the journal publication.


References

Picked up


Open questions

  • How does PLT activation influence ROUTINE, LEAK and ET capacity?
  • How is PBMC activation quantified and controlled, and how does it influence ROUTINE, LEAK and ET capacity?
  • How does 2-3 mM lactate influence respiration in MiR05, compared to 10 mM pyruvate?


Milestones

  • In progress (2018)
  • March 12: Edit template of MitoEAGLE blood cell data sheet and post on this website, send alert to co-authors (Erich, Zuzana).
  • March 12: Lund workshop circular (Eleonor / Marija) - invite further groups: Elisa Calabria, Kathrin Renner, Alexander Karabatriakis, Irene Pichler (contact US: Anthony Molina, Brian Irvin).
  • March 15: Prepare document on regulations for sensitive data (Chiara; waiting for expert-meeting)
  • March 16: Suggest topics for STSM to generate experimental data blocks for this manuscript (send to Magda).
  • March 16-31: Send reminder to fill MitoEAGLE blood cell data sheets and send to Innsbruck, specify 'Open Access' (MitoEAGLE data bank on wiki), or to be shared with co-authors.
  • April 1-30: Send reminder to write Table and Figure blocks and send to Innsbruck.
  • April 1st week: Meeting with Anthony Molina in Innsbruck.
  • April 30: MitoEAGLE workprint Version 01 - manuscript blocks arranged in work flow.
» May 28-30: MitoEAGLE Lund 2018
  • Achieved (2018)
» Feb 21-23: MitoEAGLE Poznan 2018
» Jan 29-Feb 1: MitoEAGLE Innsbruck 2018


Publication

A Working Group of the COST Action MitoEAGLE is preparing a manuscript 'Interlaboratory guide through procedures for mitochondrial respiratory studies with intact and permeabilized peripheral blood mononuclear cells and platelets'. The group is working on it with Open Access as a ‘MitoEAGLE preprint’ and the ultimate aim of publication in a scientific journal.
Compare: Gnaiger 2019 MitoFit Preprint Arch

Co-authors

The present alphabetical list of co-authors icludes all actively involved participants of MitoEAGLE Innsbruck 2018 and MitoEAGLE Poznan 2018 and will be extended by further contributors at MitoEAGLE Lund 2018 and by MitoEAGLE members submitting their valuable contributions. All co-authors will have to confirm to have made a contribution and to have read the final manuscript.

Publication strategy

  • Data linked to published papers or manuscripts in press are superior to unpublished data.
  • Inclusion of unpublished data should not block independent publication by the indivudual teams.
  • Data classified as occasional observations or preliminary results are statistically valuable when combined with comparable data from other groups - pull out your unpublished observations (data).
Acknowledgements: We thank M. Beno for management assistance. This publication is based upon work from COST Action CA15203 MitoEAGLE, supported by COST (European Cooperation in Science and Technology), and K-Regio project MitoFit (E.G.).


Labels: MiParea: Respiration, Instruments;methods, mtDNA;mt-genetics, nDNA;cell genetics, Gender  Pathology: Aging;senescence 

Organism: Human  Tissue;cell: Blood cells, Platelet  Preparation: Intact cells, Permeabilized cells  Enzyme: Marker enzyme 

Coupling state: LEAK, ROUTINE, OXPHOS, ET  Pathway: F, N, S, Gp, CIV, NS, Other combinations, ROX 


MitoFitPublication, MitoEAGLEPublication