O2k-Publications: Instruments;methods

O2k-Publications: Instruments;methods

This topic relates to methodological publications on bioenergetics.

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	Year	Reference
MiPNet28.07 NextGen-O2k Series XB manual	2023-10-19	NextGen-O2k Series XB manual
MiPNet14.06 Instrumental O2 background	2023-10-19	O2k Quality Control 2: Instrumental oxygen background correction and accuracy of oxygen flux.
MiPNet28.08 Oroboros O2k Series J manual	2023-10-19	Oroboros O2k Series J manual
MiPNet28.10 SmartPOS-service	2023-09-29	SmartPOS: Service
MiPNet19.14 SOP Hamilton microsyringes	2023-09-28	SOP for manual O2k-titrations with Hamilton microsyringes.
MiPNet28.09 O2k-Fluo Smart-Module manual	2023-09-25	O2k-Fluo Smart-Module manual
MiPNet19.03 O2k-cleaning and ISS	2023-03-14	O2k-Chamber cleaning SOP and Integrated Suction System (ISS).
MiPNet22.11 O2k-FluoRespirometer manual	2023-03-14	O2k-FluoRespirometer manual.
MiPNet06.03 POS-calibration-SOP	2023-02-06	O2k Quality Control 1: Polarographic oxygen sensors and accuracy of calibration.
Ebanks 2023 PLoS One	2023	Ebanks B, Kwiecinska P, Moisoi N, Chakrabarti L (2023) A method to assess the mitochondrial respiratory capacity of complexes I and II from frozen tissue using the Oroboros O2k-FluoRespirometer. https://doi.org/10.1371/journal.pone.0276147
Nord 2023 FASEB J	2023	Nord A, Chamkha I, Elmér E (2023) A whole blood approach improves speed and accuracy when measuring mitochondrial respiration in intact avian blood cells. https://doi.org/10.1096/fj.202201749r
Mu 2023 STAR Protoc	2023	Mu C, Shearer J (2023) Protocol for measuring respiratory function of mitochondria in frozen colon tissue from rats. https://doi.org/10.1016/j.xpro.2023.102560
Giovarelli 2023 Mol Med	2023	Giovarelli M, Serati A, Zecchini S, Guelfi F, Clementi E, Mandò C (2023) Cryopreserved placental biopsies maintain mitochondrial activity for high-resolution respirometry. https://doi.org/10.1186/s10020-023-00645-2
MiPNet26.14 Oxia	2022-10-31	Oxia - HyperOxia to HypOxia.
MiPNet27.07 Sample Holder	2022-08-09	Sample Holder.
MiPNet26.13 NextGen-O2k manual	2022-07-25	NextGen-O2k manual
MiPNet26.12 NextGen-O2k: NADH-Module	2022-05-17	NextGen-O2k: NADH-Module manual
Baglivo 2022 BEC	2022	Baglivo E, Cardoso LHD, Cecatto C, Gnaiger E (2022) Statistical analysis of instrumental reproducibility as internal quality control in high-resolution respirometry. Bioenerg Commun 2022.8. https://doi.org/10.26124/bec:2022-0008
Crowder 2022 Islets	2022	Crowder JJ, Zeng Z, Novak AN, Alves NJ, Linnemann AK (2022) Stabilization protects islet integrity during respirometry in the Oroboros Oxygraph-2K analyzer. Islets 14:128-38.
Komlodi 2022 BEC	2022	Komlódi T, Tretter L (2022) The protonmotive force – not merely membrane potential. Bioenerg Commun 2022.16. https://doi.org/10.26124/bec:2022-0016
Baglivo 2022 MitoFit-QC	2022	Baglivo E, Cardoso LHD, Cecatto C, Gnaiger E (2022) Statistical analysis of instrumental reproducibility as internal quality control in high-resolution respirometry. https://doi.org/10.26124/mitofit:2022-0018.v2 — 2022-08-04 published in Bioenerg Commun 2022.8.
Hansen 2022 Magn Reson Med	2022	Hansen K, Hansen ESS, Jespersen NRV, Bøtker HE, Pedersen M, Wang T, Laustsen C (2022) Hyperpolarized ¹³C MRI reveals large changes in pyruvate metabolism during digestion in snakes. https://doi.org/10.1002/mrm.29239
Meza-Buendia 2022 PLoS One	2022	Meza-Buendia AK, Aparicio-Trejo OE, Díaz F, Caamal-Monsreal C, Pedraza-Chaverri J, Álvarez-Delgado C, Paschke K, Rosas C (2022) High resolution respirometry of isolated mitochondria from adult Octopus maya (Class: Cephalopoda) systemic heart. https://doi.org/10.1371/journal.pone.0273554
Serna 2022 MitoFit	2022	Serna JDC, Ramos VM, Cabral-Costa JV, Vilas-Boas EA, Amaral AG, Ohya G, da Silva CCC, Kowaltowski AJ (2022) Measuring mitochondrial Ca²⁺ efflux in isolated mitochondria and permeabilized cells. https://doi.org/10.26124/mitofit:2022-0021 — 2022-07-28 published in Bioenerg Commun 2022.7.
Mihajlovic 2022 Int J Mol Sci	2022	Mihajlovic M, Vinken M (2022) Mitochondria as the target of hepatotoxicity and drug-induced liver injury: molecular mechanisms and detection methods. https://doi.org/10.3390/ijms23063315
Horwath 2022 J Physiol	2022	Horwath O, Edman S, Andersson A, Larsen FJ, Apró W (2022) THRIFTY: a novel high-throughput method for rapid fibre type identification of isolated skeletal muscle fibres. https://doi.org/10.1113/jp282959
Goudie 2022 Sci Rep	2022	Goudie L, Mancini NL, Shutt TE, Holloway GP, Mu C, Wang A, McKay DM, Shearer J (2022) Impact of experimental colitis on mitochondrial bioenergetics in intestinal epithelial cells. https://doi.org/10.1038/s41598-022-11123-w
Pallag 2022 MitoFit Proline	2022	Pallag G, Nazarian S, Ravasz D, Bui D, Komlódi T, Doerrier C, Gnaiger E, Seyfried TN, Chinopoulos C (2022) Proline oxidation leading to high electron flow through reduction of ubiquinone supports ATP production by F₁F_O-ATPase in mitochondria with inhibited Complex I. https://doi.org/10.26124/mitofit:2022-0001.v3 — 2022-05-04 published in https://doi.org/10.3390/ijms23095111
Formiga-Jr 2022 J Vis Exp	2022	Formiga-Jr MA, Camacho-Pereira J (2022) Assessing mitochondrial function in sciatic nerve by high-resolution respirometry. https://doi.org/10.3791/63690
Serna 2022 BEC	2022	Serna JDC, Ramos VM, Cabral-Costa JV, Vilas-Boas EA, Amaral AG, Ohya G, da Silva CCC, Kowaltowski AJ (2022) Measuring mitochondrial Ca²⁺ efflux in isolated mitochondria and permeabilized cells. https://doi.org/10.26124/bec:2022-0007
Zdrazilova 2022 PLOS ONE	2022	Zdrazilova L, Hansikova H, Gnaiger E (2022) Comparable respiratory activity in attached and suspended human fibroblasts. https://doi.org/10.1371/journal.pone.0264496
Mas-Bargues 2022 Antioxidants (Basel)	2022	Mas-Bargues C, García-Domínguez E, Borrás C (2022) Recent approaches to determine static and dynamic redox state-related parameters. https://doi.org/10.3390/antiox11050864
MiPNet24.12 NextGen-O2k: Q-Module	2021-10-29	NextGen-O2k: Q-Module manual
MiPNet26.11 NextGen-O2k: PB-Module	2021-10-29	NextGen-O2k: PB-Module manual
MiPNet24.16 DatLab8.0: CV-Module	2021-10-28	DatLab8.0: Cyclic voltammetry manual
MiPNet24.10 H2O2 flux analysis	2021-10-22	Hydrogen peroxide flux analysis using Amplex UltraRed assay in MiR05-Kit with DatLab 7.4
MiPNet24.09 Data analysis of mt-membrane potential	2021-09-16	Data analysis of mt-membrane potential.
MiPNet26.10 MgG data analysis	2021-09-16	Measurement of mitochondrial ATP production using Magnesium Green: DL-Protocols and data analysis with DatLab 7.4
MiPNet15.03 O2k-MultiSensor-ISE	2021-08-02	O2k-MultiSensor system with ion selective electrodes (ISE).
MiPNet12.10 TIP2k-manual	2021-07-08	Titration-Injection microPump TIP2k manual.
MiPNet19.18B POS-service	2021-06-23	Service of the polarographic oxygen sensor OroboPOS.
MiPNet17.05 O2k-Fluo LED2-Module	2021-06-22	O2k-Fluo LED2-Module.
MiPNet26.06 DatLab 7: Guide	2021-06-02	DatLab-guide through the menus.
MiPNet20.04 O2k-checklist	2021-03-12	O2k-checklist: get started with an O2k-experiment.
Gnaiger 2021 MitoFit BCA	2021	Gnaiger E (2021) Bioenergetic cluster analysis – mitochondrial respiratory control in human fibroblasts. https://doi.org/10.26124/mitofit:2021-0008
Siewiera 2021 Int J Mol Sci	2021	Siewiera K, Labieniec-Watala M, Wolska N, Kassassir H, Watala C (2021) Sample preparation as a critical aspect of blood platelet mitochondrial respiration measurements - The impact of platelet activation on mitochondrial respiration. https://doi.org/10.3390/ijms22179332
Schmidt 2021 J Biol Chem	2021	Schmidt CA, Fisher-Wellman KH, Neufer PD (2021) From OCR and ECAR to energy: perspectives on the design and interpretation of bioenergetics studies. J Biol Chem 207:101140. https://doi.org/10.1016/j.jbc.2021.101140
Went 2021 MitoFit PB	2021	Went N, Di Marcello M, Gnaiger E (2021) Oxygen dependence of photosynthesis and light-enhanced dark respiration studied by High-Resolution PhotoRespirometry. https://doi.org/10.26124/mitofit:2021-0005
Komlodi 2021 BEC AmR-O2	2021	Komlódi T, Sobotka O, Gnaiger E (2021) Facts and artefacts on the oxygen dependence of hydrogen peroxide production using Amplex UltraRed. https://doi.org/10.26124/bec:2021-0004
Jedlicka 2021 Physiol Res	2021	Jedlička J, Kunc R, Kuncová J (2021) Mitochondrial respiration of human platelets in young adult and advanced age - Seahorse or O2k? Physiol Res 70:369-79.
Komlodi 2021 BEC Q	2021	Komlódi T, Cardoso LHD, Doerrier C, Moore AL, Rich PR, Gnaiger E (2021) Coupling and pathway control of coenzyme Q redox state and respiration in isolated mitochondria. https://doi.org/10.26124/bec:2021-0003
Hoppel 2021 Cells	2021	Hoppel F, Garcia-Souza LF, Kantner-Rumplmair W, Burtscher M, Gnaiger E, Pesta D, Calabria E (2021) Human platelet mitochondrial function reflects systemic mitochondrial alterations: a protocol for application in field studies. https://doi.org/10.3390/cells10082088
Cardoso 2021 BEC MgG	2021	Cardoso LHD, Doerrier C, Gnaiger E (2021) Magnesium Green for fluorometric measurement of ATP production does not interfere with mitochondrial respiration. https://doi.org/10.26124/bec:2021-0001
Vernerova 2021 Biomedicines	2021	Vernerova A, Garcia-Souza LF, Soucek O, Kostal M, Rehacek V, Krcmova LK, Gnaiger E, Sobotka O (2021) Mitochondrial respiration of platelets: comparison of isolation methods. https://doi.org/10.3390/biomedicines9121859
MiPNet21.17 BloodCellsIsolation	2020-10-22	O2k-Protocols: Isolation of blood cells for HRR.
MiPNet24.08 Safranin Analysis Template	2020-05-13	Excel template for safranin data analysis.
MiPNet17.04 CitrateSynthase	2020-04-18	Laboratory protocol: Citrate synthase a mitochondrial marker enzyme.
MiPNet24.06 Oxygen flux analysis - DatLab 7.4	2020-04-16	Oxygen flux analysis with DatLab 7.4.
MiPNet24.14 O2k-sV-Module manual	2020-03-17	O2k-sV-Module manual.
MiPNet25.14 TPP Analysis Template	2020-##-##	Excel template for TPP data analysis.
Pola 2020 Invest New Drugs	2020	Pola M, Kolarova H, Ruzicka J, Zholobenko A, Modriansky M, Mosinger J, Bajgar R (2020) Effects of zinc porphyrin and zinc phthalocyanine derivatives in photodynamic anticancer therapy under different partial pressures of oxygen in vitro. Invest New Drugs 39:89-97.
Fisher 2020 Placenta	2020	Fisher J, McKeating D, Pennell E, Cuffe J, Holland O, Perkins A (2020) Mitochondrial isolation, cryopreservation and preliminary biochemical characterisation from placental cytotrophoblast and syncytiotrophoblast. Placenta 82:1-4.
Boehmert 2020 Transfusion	2020	Böhmert S, Kübel S, Müller MM, Weber CF, Adam EH, Dröse S, Zacharowski K, Fischer D (2020) The effect of the interruption of agitation, temporary cooling, and pneumatic tube transportation on platelet quality during storage for transfusion. Transfusion 61:1258-65.
McCann 2020 Metabolites	2020	McCann MR, McHugh CE, Kirby M, Jennaro TS, Jones AE, Stringer KA, Puskarich MA (2020) A multivariate metabolomics method for estimating platelet mitochondrial oxygen consumption rates in patients with sepsis. Metabolites 10:E139.
D'Urso 2020 Surg Endosc	2020	D'Urso A, Agnus V, Barberio M, Seeliger B, Marchegiani F, Charles AL, Geny B, Marescaux J, Mutter D, Diana M (2020) Computer-assisted quantification and visualization of bowel perfusion using fluorescence-based enhanced reality in left-sided colonic resections. Surg Endosc 35:4321-31.
Dawid 2020 Biochim Biophys Acta Bioenerg	2020	Dawid C, Weber D, Musiol E, Janas V, Baur S, Lang R, Fromme T (2020) Comparative assessment of purified saponins as permeabilization agents during respirometry. Biochim Biophys Acta Bioenerg 1861:148251.
Assis-de-Lemos 2020 Curr Protoc Toxicol	2020	Assis-de-Lemos G, Ledur PF, Karmirian K, Rehen SK, Galina A (2020) A protocol to study mitochondrial function in human neural progenitors and iPSC-derived astrocytes. Curr Protoc Toxicol 85:e97.
Injarabian 2020 Sci Rep	2020	Injarabian L, Scherlinger M, Devin A, Ransac S, Lykkesfeldt J, Marteyn BS (2020) Ascorbate maintains a low plasma oxygen level. Sci Rep 10:10659.
McLaughlin 2020b Sci Rep	2020	McLaughlin KL, Hagen JT, Coalson HS, Nelson MAM, Kew KA, Wooten AR, Fisher-Wellman KH (2020) Novel approach to quantify mitochondrial content and intrinsic bioenergetic efficiency across organs. Sci Rep 10:17599.
Nolfi-Doneganab 2020 Redox Biol	2020	Nolfi-Doneganab D, Braganzaa A, Shivaac S (2020) Mitochondrial electron transport: oxidative phosphorylation, mitochondrial oxidant production, and methods of measurement. Redox Biol 2020:101674.
Damiani 2020 Curr Opin Biotechnol	2020	Damiani C, Gaglio D, Sacco E, Alberghina L, Vanoni M (2020) Systems metabolomics: from metabolomic snapshots to design principles. Curr Opin Biotechnol 63:190-199.
Huete-Ortega 2020 MitoFit Preprint Arch EA	2020	Huete-Ortega M, Di Marcello M, Iglesias-Gonzalez J, Gnaiger E (2020) High-resolution respirometry for chloroplast and mitochondrial bioenergetics in Chlamydomonas reinhardtii ― towards biotechnology exploitations. https://doi.org/10.26124/mitofit:ea20.algaeurope.0001
Romeiro 2020 bioRxiv	2020	Romeiro NC, Ferreira CM, Oliveira MF (2020) Assessment of mitochondrial physiology of murine white adipose tissue by mechanical permeabilization and lipid depletion. bioRxiv doi: https://doi.org/10.1101/2020.02.19.956870.
Madeo 2020 US Patent	2020	Madeo F, Eisenberg T, Stekovic S (2020) Use of spermidine for the enhancement of mitochondrial respiration. US Patent US20200054579 A1.
Allen 2020 Thesis	2020	Allen FM (2020) Mitochondrial metabolism elucidated by rapid fractionation from tissue. PhD Thesis 298.
Gnaiger 2020 BEC MitoPathways	2020	Gnaiger E (2020) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 5^th ed. https://doi.org/10.26124/bec:2020-0002
MitoEAGLE muscle 1	2020	Doerrier C, Gama-Perez P, Distefano G, Pesta D, Soendergaard SD, Chroeis KM, Gonzalez-Franquesa A, Goodpaster BH, Coen P, Larsen S, Gnaiger E, Garcia-Roves PM (2020) Inter-laboratory harmonization of respiratory protocols in permeabilized human muscle fibers. - Updated: 2020-03-08
MiPNet21.16 DatLab 7 Innovations	2019-09-23	DatLab 7: innovations.
MiPNet18.10 O2k-Specifications	2019-09-19	O2k-specifications for respirometry and comprehensive OXPHOS analysis.
MiPNet22.16 DatLab 7 Innovations: DL-Protocols	2019-09-13	DatLab 7.4 Innovations: DL-Protocols
MiPNet23.12 DL-Protocols help	2019-09-13	DatLab Protocols: Help DatLab 7.
MiPNet24.11 mtMP calculation	2019-08-05	Mitochondrial membrane potential calculation
MiPNet20.14 AmplexRed H2O2-production	2019-06-24	O2k-FluoRespirometry: HRR and simultaneous determination of H₂O₂ production with Amplex UltraRed.
MiPNet20.13 Safranin mt-membranepotential	2019-06-24	O2k-FluoRespirometry: HRR and simultaneous determination of mt-membrane potential with safranin or TMRM.
Di Marcello 2019 MitoFit Preprint Arch EA	2019	Di Marcello M, Iglesias-Gonzalez J, Meszaros A, Haider M, Gnaiger E, Huete-Ortega M (2019) Partitioning between cytochrome c oxidase and alternative oxidase studied by oxygen kinetics of dark respiration in Chlamydomonas reinhardtii: a microalgae model organism. https://doi.org/10.26124/mitofit:ea19.MiPSchool.0005.v3
Braganza 2019 Mol Aspects Med	2019	Braganza A, Annarapu GK, Shiva S (2019) Blood-based bioenergetics: An emerging translational and clinical tool. Mol Aspects Med 2019:100835.
Bettink 2019 Mitochondrion	2019	Bettink MAW, Harms FA, Dollee N, Specht PAC, Raat NJH, Schoonderwoerd GC, Mik EG (2019) Non-invasive versus ex vivo measurement of mitochondrial function in an endotoxemia model in rat: toward monitoring of mitochondrial therapy. Mitochondrion 50:149-57.
Doerrier 2019 MitoFit Preprint Arch EA	2019	Doerrier C, Gama-Perez P, Distefano G, Pesta D, Soendergaard SD, Chroeis KM, Gonzalez-Franquesa A, Goodpaster BH, Coen P, Larsen S, Gnaiger E, Garcia-Roves PM (2019) Inter-laboratory harmonization of respiratory protocols in permeabilized human muscle fibers. https://doi.org/10.26124/mitofit:ea19.MiPSchool.0009
Naszai 2019 Sci Rep	2019	Nászai A, Terhes E, Kaszaki J, Boros M, Juhász L (2019) Ca⁽²⁺⁾N it be measured? Detection of extramitochondrial calcium movement with high-resolution FluoRespirometry. Sci Rep 9:19229.
Germeys 2019 Genes (Basel)	2019	Germeys C, Vandoorne T, Bercier V, Van Den Bosch L (2019) Existing and emerging metabolomic tools for ALS research. Genes (Basel) 10:E1011.
Chabi 2019 MitoFit Preprint Arch EA	2019	Chabi Béatrice, Ost M, Gama-Perez P, Dahdah N, Lemieux H, Holody CD, Carpenter RG, Tepp K, Puurand M, Kaambre T, Dubouchaud H, Cortade F, Pesta D, Calabria E, Casado M, Fernandez-Ortiz M, Acuña-Castroviejo D, Villena JA, Grefte S, Keijer J, O'Brien K, Sowton A, Murray AJ, Campbell MD, Marcinek DJ, Nollet E, Wüst R, Dayanidhi S, Gnaiger E, Doerrier C, Garcia-Roves PM (2019) Generating reference values on mitochondrial respiration in permeabilized muscle fibers. https://doi.org/10.26124/mitofit:ea19.MitoEAGLE.0001
Long 2019 Methods Mol Biol	2019	Long Q, Huang L, Huang K, Yang Q (2019) Assessing mitochondrial bioenergetics in isolated mitochondria from mouse heart tissues using Oroboros Oxygraph-2k. Methods Mol Biol 1966:237-46.
Gvozdjakova 2019 Bratisl Lek Listy	2019	Gvozdjakova A, Sumbalova Z, Kucharska J, Chladekova A, Rausova Z, Vancova O, Komlosi M, Ulicna O, Mojto V (2019) Platelet mitochondrial bioenergetic analysis in patients with nephropathies and non-communicable diseases: a new method. Bratisl Lek Listy 120:630-35.
MiPNet23.15 O2k-pH ISE-Module	2018-09-08	Measurement of proton flux with the O2k-pH ISE-Module.
MiPNet21.06 SUIT RP	2018-06-25	SUIT reference protocol for OXPHOS analysis by high-resolution respirometry.
Fisher-Wellman 2018 Cell Rep	2018	Fisher-Wellman KH, Davidson MT, Narowski TM, Lin CT, Koves TR, Muoio DM (2018) Mitochondrial diagnostics: A multiplexed assay platform for comprehensive assessment of mitochondrial energy fluxes. Cell Rep 24:3593-606.
Komlodi 2018 Methods Mol Biol	2018	Komlodi T, Sobotka O, Krumschnabel G, Bezuidenhout N, Hiller E, Doerrier C, Gnaiger E (2018) Comparison of mitochondrial incubation media for measurement of respiration and hydrogen peroxide production. Methods Mol Biol 1782:137-55.
Havird 2018 bioRxiv	2018	Havird JC, Noe GR, Link L, Torres A, Logan DC, Sloan DB, Chicco AJ (2018) Assessing mitochondrial function in angiosperms with highly divergent mitochondrial genomes. bioRxiv doi: https://doi.org/10.1101/448902.
Van Daele 2018 Medicine (Baltimore)	2018	Van Daele E, Van Nieuwenhove Y, Ceelen W, Vanhove C, Braeckman BP, Hoorens A, Van Limmen J, Varin O, Van de Putte D, Willaert W, Pattyn P (2018) Assessment of graft perfusion and oxygenation for improved outcome in esophageal cancer surgery: Protocol for a single-center prospective observational study. Medicine (Baltimore) 97:e12073.
Simard 2018 J Vis Exp	2018	Simard CJ, Pelletier G, Boudreau LH, Hebert-Chatelain E, Pichaud N (2018) Measurement of mitochondrial oxygen consumption in permeabilized fibers of Drosophila using minimal amounts of tissue. J Vis Exp 134.
Smirnova 2018 Sci Rep	2018	Smirnova IA, Ädelroth P, Brzezinski P (2018) Extraction and liposome reconstitution of membrane proteins with their native lipids without the use of detergents. Sci Rep 8:14950.
Puurand 2018 Int J Mol Sci	2018	Puurand M, Tepp K, Klepinin A, Klepinina L, Shevchuk I, Kaambre T (2018) Intracellular energy-transfer networks and high-resolution respirometry: a convenient approach for studying their function. Int J Mol Sci 19:e2933.
Ramil 2018 Thesis	2018	Ramil LR, Gulbinas A, Cesna V (2018) “HIPEC” hyperthermic intraperitoneal chemotherapy. Evaluation of intraperitoneal free cancer cells. Master's Thesis.
Doerrier 2018 Methods Mol Biol	2018	Doerrier C, Garcia-Souza LF, Krumschnabel G, Wohlfarter Y, Mészáros AT, Gnaiger E (2018) High-Resolution FluoRespirometry and OXPHOS protocols for human cells, permeabilized fibers from small biopsies of muscle, and isolated mitochondria. https://doi.org/10.1007/978-1-4939-7831-1_3
Deschaseaux 2018 US Patent	2018	Deschaseaux F, Guilloton F, Muller S, Sensebe L, Casteilla L, Carriere-Pazat A (2018) Method for obtaining human brown/beige adipocytes . US Patent US20180216070A1.
Dias 2018 Anal Biochem	2018	Dias C, Lourenco CF, Barbosa RM, Laranjinha J, Ledo A (2018) Analysis of respiratory capacity in brain tissue preparations: high-resolution respirometry for intact hippocampal slices. Anal Biochem 551:43-50.
Fischer 2018 BMC Musculoskelet Disord	2018	Fischer MJ, Horvath G, Krismer M, Gnaiger E, Goebel G, Pesta DH (2018) Evaluation of mitochondrial function in chronic myofascial trigger points - a prospective cohort pilot study using high-resolution respirometry. BMC Musculoskelet Disord 19:388.
Run DL-Protocol/Set O2 limit	2017-08-10	Online documentation of DL-Protocol function of DatLab7.
Djafarzadeh 2017 J Vis Exp	2017	Djafarzadeh S, Jakob SM (2017) High-resolution respirometry to assess mitochondrial function in permeabilized and intact cells. J Vis Exp 8.doi: 10.3791/54985..
Vienne 2017 Anal Biochem	2017	Vienne JC, Cimetta C, Dubois M, Duburcq T, Favory R, Dessein AF, Fontaine M, Joncquel-Chevalier Curt M, Cuisset JM, Douillard C, Mention-Mulliez K, Dobbelaere D, Vamecq J (2017) A fast method for high resolution oxymetry study of skeletal muscle mitochondrial respiratory chain complexes. Anal Biochem 528:57-62.
Westerlund 2017 Pediatr Res	2017	Westerlund E, Marelsson SE, Ehinger JK, Sjövall F, Morota S, Åsander Frostner E, Oldfors A, Darin N, Lundgren J, Hansson MJ, Fellman V, Elmér E (2017) Oxygen consumption in platelets as an adjunct diagnostic method for pediatric mitochondrial disease. Pediatr Res 83:455-65.
Djafarzadeh 2017b J Vis Exp	2017	Djafarzadeh S, Jakob SM (2017) Isolation of intact mitochondria from skeletal muscle by differential centrifugation for High-Resolution Respirometry measurements. J Vis Exp doi: 10.3791/55251.
MiPNet21.14 Reference sample HRR	2016-10-19	Development of a reference sample for HRR.
MiPNet21.13 Comparison mt-preparations	2016-10-18	O2k-Protocols: Mitochondrial preparations for HRR.
MiPNet21.12 Comparison mt respiration media	2016-10-18	O2k-MultiSensor: Mitochondrial respiration media for HRR and simultaneous O2k-Fluorometry.
MiPNet19.18C DatLab 6: Guide	2016-08-24	DatLab-guide through the menus.
MiPNet19.18D O2k-Series G and DatLab 6: Calibration	2016-08-24	O2k-calibration by DatLab 6.
MiPNet08.09 CellRespiration	2016-08-11	High-resolution respirometry and coupling-control protocol with living cells: ROUTINE, LEAK, ET-pathway, ROX.
MiPNet19.18A O2k-Series G: Start	2016-08-08	Oxygraph-2k: start high-resolution respirometry.
MiPNet19.18 O2k-Series G Core manual	2016-08-08	O2k-Core manual contents.
MiPNet19.18E O2 flux analysis - DatLab 6	2016-08-08	Oxygen flux analysis: DatLab real-time.
MiPNet10.04 CellRespiration	2016-08-08	An experiment with high-resolution respirometry: coupling control in cell respiration.
MiPNet21.07 MitoFit DatLab PT	2016-07-20	MitoFit DatLab proficiency test.
MiPNet15.05 NO-manual	2016-04-21	O2k-MultiSensor system with amperometric sensors: NO, H₂S, H₂O₂.
Jang 2016 J Intensive Care Med	2016	Jang DH, Greenwood JC, Spyres MB, Eckmann D (2016) Measurement of mitochondrial respiration and motility in acute care: sepsis, trauma, and poisoning. J Intensive Care Med 32:86-94.
Chowdhury 2015 Biosci Rep	2016	Chowdhury SK, Djordjevic J, Albensi B, Fernyhough P (2015) Simultaneous evaluation of substrate-dependent oxygen consumption rates and mitochondrial membrane potential by TMRM and safranin in cortical mitochondria. Biosci Rep 36:e00286.
Stier 2016 Methods Ecol Evol	2016	Stier A, Romestaing C, Schull Q, Lefol E, Robin JP, Roussel D, Bize P (2016) How to measure mitochondrial function in birds using red blood cells: a case study in the king penguin and perspectives in ecology and evolution. Methods Ecol Evol doi:10.1111/2041-210X.12724.
Ojuka 2016 Am J Physiol Endocrinol Metab	2016	Ojuka E, Andrew B, Bezuidenhout N, George S, Maarman G, Madlala HP, Mendham A, Osiki PO (2016) Measurement of β-oxidation capacity of biological samples by respirometry: a review of principles and substrates. Am J Physiol Endocrinol Metab 310:E715-23. https://doi.org/10.1152/ajpendo.00475.2015
Fisar 2016a Folia Biol (Praha)	2016	Fisar Z, Hroudova J (2016) Pig brain mitochondria as a biological model for study of mitochondrial respiration. Folia Biol (Praha) 62:15-25.
Salin 2016 Physiol Rep	2016	Salin K, Villasevil EM, Auer SK, Anderson GJ, Selman C, Metcalfe NB, Chinopoulos C (2016) Simultaneous measurement of mitochondrial respiration and ATP production in tissue homogenates and calculation of effective P/O ratios. Physiol Rep 10.14814/phy2.13007.
Ruas 2016 PLOS ONE	2016	Ruas JS, Siqueira-Santos ES, Amigo I, Rodrigues-Silva E, Kowaltowski AJ, Castilho RF (2016) Underestimation of the maximal capacity of the mitochondrial electron transport system in oligomycin-treated cells. PLOS ONE 11:e0150967.
Lark 2016 Am J Physiol Cell Physiol	2016	Lark DS, Torres MJ, Lin CT, Ryan TE, Anderson EJ, Neufer PD (2016) Direct real-time quantification of mitochondrial oxidative phosphorylation efficiency in permeabilized skeletal muscle myofibers. Am J Physiol Cell Physiol 311:C239-45.
Khattar 2016 J Neurosci Methods	2016	Khattar NK, Yablonska S, Baranov SV, Baranova OV, Kretz ES, Larkin TM, Carlisle DL, Richardson RM, Friedlander RM (2016) Isolation of functionally active and highly purified neuronal mitochondria from human cortex. J Neurosci Methods 263:1-6.
Osiki 2016 FASEB J	2016	Osiki PO, Ojuka E, Marmaan G (2016) An investigation of the suitability of using octanoylcarnitine together with malate as a substrate combination for assessing Beta-oxidation using High Resolution Respirometry. FASEB J 30: 1015.12 .
Dechandt 2016 Anal Biochem	2016	Dechandt CRP, Couto-Lima CA, Alberici LC (2016) Triglyceride depletion of brown adipose tissue enables analysis of mitochondrial respiratory function in permeabilized biopsies. Anal Biochem 515:55-60.
Bai 2016 PLOS ONE	2016	Bai F, Fink BD, Yu L, Sivitz WI (2016) Voltage-dependent regulation of Complex II energized mitochondrial oxygen flux. PLOS ONE 11:e0154982.
Reich 2016 Thesis	2016	Reich V (2016) Pathophysiologie und Verfahrensentwicklung: Mechanismen der Metabolisierung von Schwefelwasserstoff im mitochondrialen Atmungskreislauf von Lungenalveolarmakrophagen. Dissertation p91.
MiPNet17.03 Shredder vs Fibers	2015-06-18	Mitochondrial respiration in permeabilized fibers versus homogenate from fish liver and heart. An application study with the PBI-Shredder.
MiPNet06.06 Chemical O2 background	2015-04-27	Oxygraph assay of cytochrome c oxidase activity: chemical background correction.
Canto 2015 Curr Protoc Mouse Biol	2015	Cantó C, Garcia-Roves PM (2015) High-resolution respirometry for mitochondrial characterization of ex vivo mouse tissues. Curr Protoc Mouse Biol 5:135-53.
Makrecka-Kuka 2015 Biomolecules	2015	Makrecka-Kuka M, Krumschnabel G, Gnaiger E (2015) High-resolution respirometry for simultaneous measurement of oxygen and hydrogen peroxide fluxes in permeabilized cells, tissue homogenate and isolated mitochondria. https://doi.org/10.3390/biom5031319
Weissig 2015 Methods Mol Biol II	2015	Weissig V, Edeas M, eds (2015) Mitochondrial medicine: Volume II, Manipulating mitochondrial function. Methods Mol Biol 1265:1-447.
Kake-Guena 2015 J Exp Zool A Ecol Genet Physiol	2015	Kake-Guena SA, Touisse K, Vergilino R, Dufresne F, Blier PU, Lemieux H1 (2015) Assessment of mitochondrial functions in Daphnia pulex clones using high-resolution respirometry. J Exp Zool A Ecol Genet Physiol 323:292-300.
Cagnone 2015 Methods Mol Biol	2015	Cagnone G, Vaghjiani V, Lee W, Sun C, Johnson J, Yeung KY, St John JC (2015) Analysis of the mitochondrial DNA and its replicative capacity in induced pluripotent stem cells. Methods Mol Biol 1357:231-67.
Kluckova 2015 Methods Mol Biol	2015	Kluckova K, Dong L, Bajzikova M, Rohlena J, Neuzil J (2015) Evaluation of respiration of mitochondria in cancer cells exposed to mitochondria-targeted agents. Methods Mol Biol 1265:181-94.
Harrison 2015 J Appl Physiol	2015	Harrison DK, Fasching M, Fontana-Ayoub M, Gnaiger E (2015) Cytochrome redox states and respiratory control in mouse and beef heart mitochondria at steady-state levels of hypoxia. https://doi.org/10.1152/japplphysiol.00146.2015
Abou-Hamdan 2015 Methods Enzymol	2015	Abou-Hamdan A, Guedouari-Bounihi H, Lenoir V, Andriamihaja M, Blachier F, Bouillaud F (2015) Oxidation of H2S in mammalian cells and mitochondria. Methods Enzymol 554:201-28.
Krumschnabel 2015 Methods Mol Biol	2015	Krumschnabel G, Fontana-Ayoub M, Sumbalova Z, Heidler J, Gauper K, Fasching M, Gnaiger E (2015) Simultaneous high-resolution measurement of mitochondrial respiration and hydrogen peroxide production. Methods Mol Biol 1264:245-61.
MiPNet20.17 MiP2015 Lucni Bouda	2015	Pecina P et al, eds (2015) Mitochondrial physiology conference. MiP2015. Mitochondr Physiol Network 20.17:87 pp.
Wuest 2015 J Physiol	2015	Wüst RC, Helmes M, Stienen GJ (2015) Rapid changes in NADH and flavin autofluorescence in rat cardiac trabeculae reveal large mitochondrial complex II reserve capacity. J Physiol 593:1829-40.
MiPNet19.01 O2k-Core Manual Series F DatLab 5	2014-03	O2k-Core Manual - up to O2k-Series F and DatLab 5.
MiPNet12.11 MitoRespiration	2014-02-20	Flux control ratios in isolated mitochondria. OXPHOS capacity and respiratory control.
Karabatsiakis 2014 Transl Psychiatry	2014	Karabatsiakis A, Boeck C, Salinas-Manrique J, Kolassa S, Calzia E, Dietrich DE, Kolassa IT (2014) Mitochondrial respiration in peripheral blood mononuclear cells correlates with depressive subsymptoms and severity of major depression. Transl Psychiatry 4:e397.
Laner 2014 Mitochondr Physiol Network MiP2014	2014	Laner V, Gnaiger E, eds (2014) Mitochondrial physiology – methods, concepts and biomedical perspectives. MiP2014. ISBN 978-3-9502399-9-7
Schiffer 2014 FASEB J	2014	Schiffer TA, Ekblom B, Lundberg JO, Weitzberg E, Larsen FJ (2014) Dynamic regulation of metabolic efficiency explains tolerance to acute hypoxia in humans. FASEB J 28:4303-11.
Ryan 2014 J Physiol	2014	Ryan TE, Brophy P, Lin CT, Hickner RC, Neufer PD (2014) Assessment of in vivo skeletal muscle mitochondrial respiratory capacity in humans by near-infrared spectroscopy: a comparison with in situ measurements. J Physiol 592:3231-41.
Krumschnabel 2014 Methods Enzymol	2014	Krumschnabel G, Eigentler A, Fasching M, Gnaiger E (2014) Use of safranin for the assessment of mitochondrial membrane potential by high-resolution respirometry and fluorometry. https://doi.org/10.1016/B978-0-12-416618-9.00009-1
Larsen 2014 Anal Biochem	2014	Larsen S, Kraunsøe R, Gram M, Gnaiger E, Helge JW, Dela F (2014) The best approach: homogenization or manual permeabilization of human skeletal muscle fibers for respirometry? Anal Biochem 446:64-8.
Herbst 2014 J Physiol	2014	Herbst EA, Paglialunga S, Gerling C, Whitfield J, Mukai K, Chabowski A, Heigenhauser GJ, Spriet LL, Holloway GP (2014) Omega-3 supplementation alters mitochondrial membrane composition and respiration kinetics in human skeletal muscle. J Physiol 592:1341-52.
Van Bergen 2014 Mitochondrion	2014	Van Bergen NJ, Blake RE, Crowston JG, Trounce IA (2014) Oxidative phosphorylation measurement in cell lines and tissues. Mitochondrion 15:24-33.
Chinopoulos 2014 Methods Enzymol	2014	Chinopoulos C, Kiss G, Kawamata H, Starkov AA (2014) Measurement of ADP-ATP exchange in relation to mitochondrial transmembrane potential and oxygen consumption. Methods Enzymol 542:333-48. doi:10.1016/B978-0-12-416618-9.00017-0
Chakraborty 2014 J Cardiovasc Dis	2014	Chakraborty M, Phillips ARJ, Macdonald J, Windsor JA, Hickey AJR (2014) Mitochondrial respiration in mononuclear cells and heart fibers in spontaneously hypertensive rats. J Cardiovasc Dis ISSN:2330-459.
Gnaiger 2014 MitoPathways	2014	Gnaiger E (2014) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 4^th ed. Mitochondr Physiol Network 19.12. Oroboros MiPNet Publications, Innsbruck:80 pp. — see 5^th edition: Gnaiger 2020 BEC MitoPathways.
Pecina 2014 Biochim Biophys Acta Clinical	2014	Pecina P, Houstkova H, Mracek T, Pecinova A, Nuskova H.Tesarova M, Hansikova H, Janota J, Zemanc J, Houstek J (2014) Noninvasive diagnostics of mitochondrial disorders in isolated lymphocytes with high resolution respirometry. Biochim Biophys Acta Clinical 2:62–71.
Kettunen 2013 Thesis University of Applied Sciences - Turku	2013	Kettunen J (2013) Ruskean rasvan hapenkulutuksen mittaaminen. Thesis University of Applied Sciences - Turku pp106.
Perry 2013 Diabetes	2013	Perry CG, Kane DA, Lanza IR, Neufer PD (2013) Methods for assessing mitochondrial function in diabetes. Diabetes 62:1041-53. https://doi.org/10.2337/db12-1219
Sjoevall 2013 Mitochondrion	2013	Sjövall F, Ehinger JK, Marelsson SE, Morota S, Asander Frostner E, Uchino H, Lundgren J, Arnbjörnsson E, Hansson Magnus J, Fellman V, Elmér E (2013) Mitochondrial respiration in human viable platelets - methodology and influence of gender, age and storage. Mitochondrion 13:7-14.
Chu 2013 PLoS One	2013	Chu MJ, Phillips AR, Hosking AW, Macdonald JR, Bartlett AS, Hickey AJ (2013) Hepatic mitochondrial function analysis using needle liver biopsy samples. PLoS One 8:e79097.
Pesta 2012 Methods Mol Biol	2012	Pesta D, Gnaiger E (2012) High-resolution respirometry. OXPHOS protocols for human cells and permeabilized fibers from small biopsies of human muscle. Methods Mol Biol 810:25-58. https://doi.org/10.1007/978-1-61779-382-0_3
Larsen 2012 CryoLetters	2012	Larsen S, Wright-Paradis C, Gnaiger E, Helge JW, Boushel RC (2012) Cryopreservation of human skeletal muscle impairs mitochondrial function. Cryo Letters 33:170-6.
Horan 2012 J Gerontol A Biol Sci Med Sci	2012	Horan MP, Pichaud N, Ballard JWO (2012) Review: Quantifying mitochondrial dysfunction in complex diseases of aging. J Gerontol A Biol Sci Med Sci 67:1022-35. https://doi.org/10.1093/gerona/glr263
Gnaiger 2012 Mitochondr Physiol Network Bioblast 2012	2012	Gnaiger E, Meissner B, Laner V, eds (2012) Bioblast 2012: Mitochondrial Competence. Mitochondr Physiol Network 17.12. Oroboros MiPNet Publications, Innsbruck:96 pp. ISBN 978-3-9502399-5-9
MiPNet08.12 IOC22	2011-12-11	NO effect on mitochondrial oxygen kinetics at low oxygen. O2k workshop Report.
Chinopoulos 2011 Methods Mol Biol	2011	Chinopoulos C, Zhang SF, Thomas B, Ten V, Starkov AA (2011) Isolation and functional assessment of mitochondria from small amounts of mouse brain tissue. Methods Mol Biol 793:311-24.
Hench 2011 PloS One	2011	Hench J, Bratic Hench I, Pujol C, Ipsen S, Brodesser S, Mourier A, Tolnay M, Frank S, Trifunovic A (2011) A tissue-specific approach to the analysis of metabolic changes in Caenorhabditis elegans. PloS One 6:e28417.
Scandurra 2010 Adv Exp Med Biol	2010	Scandurra FM, Gnaiger E (2010) Cell respiration under hypoxia: facts and artefacts in mitochondrial oxygen kinetics. https://doi.org/10.1007/978-1-4419-1241-1_2
MiPNet06.05 Test Experiments on O2k-Specifications	2010	Gnaiger E (2010) Test experiments on specifications of the Oroboros Oxygraph. Mitochondr Physiol Network 6.5.
Sommer 2010 Eur Respir J	2010	Sommer N, Pak O, Schörner S, Derfuss T, Krug A, Gnaiger E, Ghofrani HA, Schermuly RT, Huckstorf C, Seeger W, Grimminger F, Weissmann N (2010) Mitochondrial cytochrome redox states and respiration in acute pulmonary oxygen sensing. https://doi.org/10.1183/09031936.00013809
Komary 2010 Biochim Biophys Acta	2010	Komary Z, Tretter L, Adam-Vizi V (2010) Membrane potential-related effect of calcium on reactive oxygen species generation in isolated brain mitochondria. Biochim Biophys Acta 1797:922-8.
Lanza 2009 Methods Enzymol	2009	Lanza IR, Nair KS (2009) Functional assessment of isolated mitochondria in vitro. Methods Enzymol 457:349-72.
Benani 2009 J Neurosci Methods	2009	Benani A, Barquissau V, Carneiro L, Salin B, Colombani A-L, Leloup C, Casteilla L, Rigoulet M, Pénicaud L (2009) Method for functional study of mitochondria in rat hypothalamus. J Neurosci Methods 178:301-7.
Rostrup M 2008 Amino Acids	2008	Rostrup M, Fossbakk A, Hauge A, Kleppe R, Gnaiger E, Haavik J (2008) Oxygen dependence of tyrosine hydroxylase. Amino Acids 34:455-64.
Gnaiger 2008 POS	2008	Gnaiger E (2008) Polarographic oxygen sensors, the oxygraph and high-resolution respirometry to assess mitochondrial function. In: Mitochondrial dysfunction in drug-induced toxicity (Dykens JA, Will Y, eds) John Wiley & Sons, Inc, Hoboken, NJ:327-52.
Park 2007 Sensors IEEE	2007	Park J, Chang J, Choi M, Pak JJ, Lee DY, Pak YK (2007) Microfabricated Clark-type sensor for measuring dissolved oxygen. Sensors IEEE: 1412-1415.
Mukhanov 2006 Thermoc Acta	2006	Mukhanov VS, Kemp RB (2006) Simultaneous photocalorimetric and oxygen polarographic measurements on Dunaliella maritima cells reveal a thermal discrepancy that could be due to nonphotochemical quenching. Thermochimica Acta 446:11-19.
Labajova 2006 Anal Biochem	2006	Labajova A, Vojtiskova A, Krivakova P, Kofranek J, Drahota Z, Houstek J (2006) Evaluation of mitochondrial membrane potential using a computerized device with a tetraphenylphosphonium-selective electrode. Anal Biochem 353:37-42.
Huetter 2006 Exp Gerontol	2006	Hütter E, Unterluggauer H, Garedew A, Jansen-Dürr P, Gnaiger E (2006) High-resolution respirometry - a modern tool in aging research. Exp Gerontol 41:103-9.
Garedew 2005 Eur Shock Soc	2005	Garedew A, Hütter E, Haffner B, Gradl P, Gradl L, Jansen-Dürr P, Gnaiger E (2005) High-resolution respirometry for the study of mitochondrial function in health and disease. The Oroboros O2k. Proc 11th Congress Eur Shock Soc, Vienna, Austria (Redl H, ed) Medimond, Bologna:107-11.
Doeller 2005 Anal Biochem	2005	Doeller JE, Isbell TS, Benavides G, Koenitzer J, Patel H, Patel RP, Lancaster JR Jr, Darley-Usmar VM, Kraus DW (2005) Polarographic measurement of hydrogen sulfide production and consumption by mammalian tissues. Anal Biochem 341:40-51.
Kraft 2004 Thesis Universität Halle-Wittenberg - Germany	2004	Kraft A (2004) Langzeitstabilität der Mitochondrienfunktion permeabilisierter Muskelfasern in der Diagnostik mitochondrialer Enzephalomyopathien. Thesis Universität Halle-Wittenberg - Germany 74pp.
Kalbacova 2003 Cytometry	2003	Kalbácová M, Vrbacký M, Drahota Z, Melková Z (2003) Comparison of the effect of mitochondrial inhibitors on mitochondrial membrane potential in two different cell lines using flow cytometry and spectrofluorometry. Cytometry 52A:110-6.
Kuznetsov 2002 Anal Biochem	2002	Kuznetsov AV, Strobl D, Ruttmann E, Königsrainer A, Margreiter R, Gnaiger E (2002) Evaluation of mitochondrial respiratory function in small biopsies of liver. Anal Biochem 305:186-94.
MiPNet06.01 O2k-Overview	2001	Gnaiger E (2001) The Oxygraph for high-resolution respirometry. Mitochondr Physiol Network 06.01.
Gnaiger 2001 Respir Physiol	2001	Gnaiger E (2001) Bioenergetics at low oxygen: dependence of respiration and phosphorylation on oxygen and adenosine diphosphate supply. https://doi.org/10.1016/S0034-5687(01)00307-3
Gnaiger 2000 Life in the Cold	2000	Gnaiger E, Kuznetsov AV, Schneeberger S, Seiler R, Brandacher G, Steurer W, Margreiter R (2000) Mitochondria in the cold. In: Life in the Cold (Heldmaier G, Klingenspor M, eds) Springer, Berlin, Heidelberg:431-42. https://doi.org/10.1007/978-3-662-04162-8_45
MiPNet04.05 Titration-Injection	1999-01	From step titration to ramp injection: Uncoupling by FCCP with TIP.
Boveris 1999 Methods Enzymol	1999	Boveris A, Costa LE, Cadenas E, Poderoso JJ (1999) Regulation of mitochondrial respiration by ADP, O2 and NO. Methods Enzymol 301:188-98.
Kuznetsov 1998 BTK	1998	Kuznetsov AV, Lassnig B, Margreiter R, Gnaiger E (1998) Diffusion limitation of oxygen versus ADP in permeabilized muscle fibers. In BioThermoKinetics in the Post Genomic Era (Larsson C, Påhlman I-L, Gustafsson L, eds) Chalmers Reproservice, Göteborg:273-6.
Gnaiger 1998 BTK-HRR	1998	Gnaiger E, Kuznetsov AV, Lassnig B, Fuchs A, Reck M, Renner K, Stadlmann S, Rieger G, Margreiter R (1998) High-resolution respirometry. Optimum permeabilization of the cell membrane by digitonin. In BioThermoKinetics in the Post Genomic Era (Larsson C, Pahlman I-L, Gustafsson L, eds) Chalmers Reproservice, Göteborg:89-95.
Gnaiger 1998 Biochim Biophys Acta	1998	Gnaiger E, Lassnig B, Kuznetsov AV, Margreiter R (1998) Mitochondrial respiration in the low oxygen environment of the cell: Effect of ADP on oxygen kinetics. Biochim Biophys Acta 1365:249-54. https://doi.org/10.1016/S0005-2728(98)00076-0
MiPNet02.05 DatLab2 O2Kinetics	1997-01	DatLab 2. Analysis of oxygen kinetics.
Gnaiger 1995 J Bioenerg Biomembr	1995	Gnaiger E, Steinlechner-Maran R, Méndez G, Eberl T, Margreiter R (1995) Control of mitochondrial and cellular respiration by oxygen. https://doi.org/10.1007/BF02111656
Haller 1994 Anal Biochem	1994	Haller T, Ortner M, Gnaiger E (1994) A respirometer for investigating oxidative cell metabolism. Toward optimization of respiratory studies. Anal Biochem 218:338-42.
Mendez 1994 BTK-191	1994	Méndez G, Gnaiger E (1994) How does oxygen pressure control oxygen flux in isolated mitochondria? A methodological approach by high-resolution respirometry and digital data analysis. In: What is Controlling Life? (Gnaiger E, Gellerich FN, Wyss M, eds) Modern Trends in BioThermo-Kinetics 3. Innsbruck Univ Press:191-4.
MiPNet03.03 Internat-Oxygraph-Workshops	1991-	Innsbruck AT, since 1991. International oxygraph workshops on high-resolution respirometry, IOC.

Gnaiger E, Forstner H, eds (1983) Polarographic Oxygen Sensors. Aquatic and Physiological Applications. Springer, Berlin, Heidelberg, New York: 370 pp. »Contents

O2k-Publications: Instruments; methods - Abstracts

Sort in ascending/descending order by a click on one of the small symbols in squares below.

	Year	Reference
Cardoso 2023 BPS2023 San Diego	2023	Cardoso LHD, Timon-Gomez A, Doerrier C, Garcia-Souza LF, Gnaiger Erich (2023) Respirometric substrate-uncoupler-inhibitor titration protocols for carbohydrate and fatty acid metabolism: from heart to brain mitochondria. 67th Annual Meeting of the Biophysical Society.
Schmitt 2023 BPS2023 San Diego	2023	Schmitt S, Cardoso LHD, Cecatto C, Komlodi T, Gnaiger Erich (2023) Mitochondrial bioenergetics – a quantitative analytical and diagnostic approach. 67th Annual Meeting of the Biophysical Society.
Baglivo 2023 ESCI Prague	2023	Baglivo E, Timon-Gomez A, Gnaiger E (2023) The cytochrome c test for respirometric quality control of the integrity of the mitochondrial outer membrane. 57^th Annual Scientific Meeting of the European Society for Clinical Investigation.
Komlodi 2022 Abstract Bioblast	2022	3.1. «10+5» Komlódi Timea, Tretter L (2022) The protonmotive force – not merely membrane potential. Bioblast 2022: BEC Inaugural Conference. In: https://doi.org/10.26124/bec:2022-0001 »MitoFit Preprint«
Cecatto 2022 EBEC	2022	Cecatto C, Cardoso LHD, Gnaiger E (2022) Mitochondrial calcium uptake capacity is lower than calcium retention capacity in the presence and absence of cyclosporin A. EBEC 2022.
Gnaiger 2022 ESCI Bari	2022	Gnaiger E (2022) Bioenergetic cluster analysis – diagnostic evaluation of mitochondrial respiratory control in human fibroblasts. 56^th Annual Scientific Meeting of the European Society for Clinical Investigation.
Baglivo 2022a ESCI Bari	2022	Baglivo E, Cardoso LHD, Cecatto C, Gnaiger E (2022) Quality control of mitochondrial respiration medium in high-resolution respirometry with living and permeabilized cells. 56^th Annual Scientific Meeting of the European Society for Clinical Investigation.
Baglivo 2022b ESCI Bari	2022	Baglivo E, Cardoso LHD, Cecatto C, Gnaiger E (2022) Statistical analysis of instrumental reproducibility in high-resolution respirometry. 56^th Annual Scientific Meeting of the European Society for Clinical Investigation.
Gnaiger 2022 Abstract Bioblast-PB	2022	P03. Went N, Di Marcello M, Gnaiger Erich (2022) Oxygen dependence of photosynthesis and light-enhanced dark respiration studied by high-resolution PhotoRespirometry. Bioblast 2022: BEC Inaugural Conference. In: https://doi.org/10.26124/bec:2022-0001 »MitoFit Preprint«
Axelrod 2022 Abstract Bioblast	2022	3.6. «5 min» Axelrod Christopher L, Heintz EC, Albaugh VL, Kirwan JP (2022) Segmental regulation of intestinal mitochondrial function. Bioblast 2022: BEC Inaugural Conference. In: https://doi.org/10.26124/bec:2022-0001
Cardoso 2022b EBEC	2022	Baglivo E, Cardoso LHD, Cecatto C, Gnaiger E (2022) Instrumental quality control and evaluation of mitochondrial respiration medium in high-resolution respirometry with living and permeabilized cells. EBEC 2022.
Doerrier 2020 PaduaMuscleDays	2020	Doerrier C, Di Marcello M, Gnaiger E (2020) Commitment to reproducibility in targeting mitochondrial respiratory control: basic and advanced applications of the O2k-FluoRespirometer. PaduaMuscleDays.
Doerrier 2019 MiP2019	2019	Inter-laboratory harmonization of respiratory protocols in permeabilized human muscle fibers.
Chabi 2019 MiP2019	2019	Generating reference values on mitochondrial respiration in permeabilized muscle fibers.
Dahdah 2019 MiP2019	2019	Approaches to assess mitochondrial respiration in white adipose tissue.
Garcia-Roves 2019 MiPschool Coimbra	2019	Generating reference values on mitochondrial respiration in permeabilized muscle fibers.
Calabria 2019 MiPschool Coimbra	2019	Investigating mitochondrial function in blood cells by high-resolution respirometry: contribution to an interlaboratory study. MitoEAGLE WG4.
Doerrier 2018 MiP2018c	2018	Inter-laboratory study on human permeabilized myofibers: effects of fiber preparation, respiration buffer, and blebbistatin on mitochondrial respiratory capacity and oxygen limitation.
Cardoso 2018 MiPschool Tromso E2	2018	Concomitant respiration and ATP production measurements to analyse P»/O₂ ratios at physiological normoxia.
Garcia-Roves 2018 MiP2018b	2018	Generating mitochondrial respirometry reference values from permeabilized mouse soleus muscle fibers. Working Group 2 report. Garcia-Roves_Presentation
Pranger 2018 Emerging Concepts in Mitochondrial Biology	2018	High-resolution respirometry with a reduced chamber volume – which are the compromises in OXPHOS analysis?
Chang 2018 Life Sciences Meeting 2018 Innsbruck AT	2018	pH dependence of mitochondrial respiration and H₂O₂ production in oral cancer cells – a pilot study.
Krajcova 2018 MiPschool Tromso E2	2018	High-resolution respirometry to assess function of mitochondria in native homogenates of human heart muscle.
Garcia-Souza 2018 Life Sciences Meeting 2018 Innsbruck AT	2018	A respirometric cell viability test for peripheral-blood mononuclear cells and platelets.
Sobotka 2018 MiP2018	2018	Measurement of ROS production under hypoxia and unexpected methodological pitfalls of Amplex UltraRed assay.
Huete-Ortega 2018 MiPschool Tromso E2	2018	High-resolution respirometry: new perspectives for the study of bioenergetics in algae and plants.
Keller 2018 MiP2018	2018	The structural molecular diversity of mitochondrial cardiolipins.
Ganetzky 2018 IOC134	2018	SUIT protocol development for zebrafish embryos.
Keppner 2018 MiP2018	2018	Effects of cryopreservation of peripheral blood mononuclear cells.
Doerrier 2018 MiP2018b	2018	Evaluation of anaplerotic pathways to avoid artefacts in respirometric measurement of fatty acid oxidation.
Meszaros 2017 MiPschool Obergurgl	2017	(Very) High-resolution respirometry – a deep dive into oxygen dependence of mitochondrial respiration.
Laner 2016 Abstract MitoFit Science Camp 2016	2016	OXPHOS and ET-capacity in permeabilized fibers of canine superathletes. Analysis of HRR data presenting unexpected challenges.
Sparagna 2016 Abstract IOC109	2016	Sparagna GC (2016) Measuring cardiac mitochondrial function in pediatric patients before and after implantation of a left ventricular assist device. Mitochondr Physiol Network 21.01.
Sumbalova 2016b Abstract MitoFit Science Camp 2016	2016	Human blood cells: isolation and HRR.
Markova 2016 Abstract MitoFit Science Camp 2016	2016	Porcine hearts samples preparation: PBI-Shredder or saponin?
Gnaiger 2016 Abstract SFRR Australasia 2016	2016	Facts and artefacts in measurements of H₂O₂ production under hypoxia.
Krumschnabel 2016b Abstract MitoFit Science Camp 2016	2016	O2k-MultiSensor: Mitochondrial respiration media for HRR and simultaneous O2k-Fluorometry.
Sumbalova 2016 Abstract Mito Xmas Meeting Innsbruck	2016	Methods for evaluation of mitochondrial membrane potential with multi-sensor high-resolution respirometry: potentiometry vs fluorometry.
Bezuidenhout 2016b Abstract MitoFit Science Camp 2016	2016	Analysis and comparison of mitochondrial function using cooling plate or ice during mechanical separation of mouse skeletal muscle fibers.
Krumschnabel 2016 Abstract Mito Xmas Meeting Innsbruck	2016	Establishment of a reference sample for high-resolution respirometry.
Krumschnabel 2016a Abstract MitoFit Science Camp 2016	2016	O2k-Protocols: Mitochondrial preparations for HRR.
Volani 2015 Abstract IOC106	2015	Volani C, Haschka D, Demetz E, Doerrier C, Gnaiger E, Weiss G (2015) Determination of mitochondrial respiration in peripheral blood mononuclear cells. Mitochondr Physiol Network 20.10.
Kaambre 2015 Abstract MiP2015	2015	Quantitative characterization of respiratory parameters of human colorectal and breast cancer clinical material.
Ehinger 2015 Abstract MiPschool London 2015	2015	Cell-permeable mitochondrial complex II substrates – a new compound class for treatment of complex I-linked mitochondrial disease.
Abdel-Rahman 2015 Abstract MiPschool Cape Town 2015	2015	Assessment of NADPH-dependent oxygen consumption and hydrogen peroxide production by high-resolution respirometry and EPR spectroscopy.
Shevchuk 2015 Abstract MiP2015	2015	Analysis of energy fluxes in colorectal cancer saponin skinned tissues and Caco-2 cells.
Hoppel 2015 Abstract MiPschool London 2015	2015	Human blood cell types as study models of mitochondrial respiration and H₂O₂ production.
Laner 2015 Abstract MiPschool Cape Town 2015	2015	The Oroboros Oxygraph-2k for high-resolution respirometry and O2k-Fluorometry: a new quality in OXPHOS analysis.
Doerrier 2015 Abstract MiP2015	2015	Simultaneous measurement of mitochondrial respiration, hydrogen peroxide production, and NADH autofluorescence to assess mitochondrial function.
Laner 2015 Abstract MiPschool Greenville 2015	2015	Comparative mitochondrial physiology: OXPHOS and ET capacity in permeabilized fibers of canine superathletes.
Maarman 2015 Abstract MiPschool Cape Town 2015	2015	Characterisation of mitochondrial function in a model of pulmonary hypertension-induced right ventricular failure.
Sumbalova 2015 Abstract MiP2015	2015	High-resolution measurement of mitochondrial membrane potential and respiration – comparison of potentiometric and fluorometric methods.
Doerrier 2015 Abstract MiPschool Greenville 2015	2015	"Succinate paradox" study by high resolution respirometry combined with fluorometry and spectrofluorometry: NextGen-O2k.
Mussulini 2015 Abstract MiPschool London	2015	Changes of brain substrates preference and metabolism during seizure induced by pentylenetetrazole in adult zebrafish.
Laner 2015 Abstract MiP2015	2015	Comparative mitochondrial physiology: OXPHOS and ET capacity in permeabilized fibers of canine superathletes.
Gnaiger 2015 Abstract MiP2015	2015	Mitochondrial function of cyropreserved HEK 293T cells: development of a reference sample for high-resolution respirometry.
Pettersen 2015 Abstract MiPschool London 2015	2015	Metabolic adjustments after reversible induction of mitochondrial biogenesis via AMPK/NRF1 in HeLa cells.
Sumbalova 2014 Abstract MiP2014	2014	Optimization of malate concentration for high-resolution respirometry: mitochondria from rat liver and brain.
Ali 2014 Abstract MiP2014	2014	Oxygen-consuming and ROS-producing activities in synaptosomes.
Meszaros 2014 Abstract MiP2014	2014	Methodological aspects of assessing mitochondrial function in small intestinal mucosal samples of rats and guinea pigs.
Perry 2014 Abstract MiP2014	2014	Evaluation of critical experimental parameters for assessing mitochondrial bioenergetics in permeabilized myofibers.
Krumschnabel 2013 Abstract MiP2013	2013	Krumschnabel G, Eigentler A, Fontana-Ayoub M, Draxl A, Fasching M, Gnaiger E (2013) Tissue homogenates for respiratory OXPHOS analysis in comparative mitochondrial physiology: mouse and trout – heart and liver. Mitochondr Physiol Network 18.08.
Laner 2013 ASMRM	2013	Laner V, Gradl P, Eigentler A, Fontana-Ayoub M, Fasching M, Gnaiger E (2013) The Oroboros O2k for high-resolution respirometry and O2k-Fluorometry: a new quality in OXPHOS analysis. ASMRM2013.
Cervinkova 2012 Abstract Bioblast	2012	Cervinkova Z, Stankova P, Cervinka M, Kucera O, Drahota Z (2012) Evaluation of mitochondrial functions – an important tool for experimental hepatology. Mitochondr Physiol Network 17.12.
Fasching 2012 Abstract Bioblast	2012	Fasching M, Sumbalova Z, Gnaiger E (2012) O2k-Fluorometry - a MitoCom project. Mitochondr Physiol Network 17.12.
Sumbalova 2011 Abstract Kagoshima	2011	Sumbalova Z, Harrison DK, Gradl P, Fasching M, Gnaiger E (2011) Mitochondrial membrane potential, coupling control, H₂O₂ production, and the upper limit of mitochondrial performance. Abstract Kagoshima.
Fasching 2011 Abstract Berlin	2011	Fasching M, Harrison DK, Tretter L, Gnaiger E (2011) Combination of high-resolution respirometry and fluorometry for continuous monitoring of hydrogen peroxide production by mitochondria with resolution in the nanomolar range. Abstract Berlin.

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