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Difference between revisions of "Krumschnabel 2013 Abstract MiP2013"

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{{Abstract
{{Abstract
|title=Gnaiger E (2013) Normalization of respiration for OXPHOS analysis in comparative mitochondrial physiology: A study of trout heart and liver mitochondria. Mitochondr Physiol Network 18.08.
|title=Krumschnabel G, Eigentler A, Fontana-Ayoub M, Draxl A, Fasching M, Gnaiger E (2013) Tissue homogenates for respiratory OXPHOS analysis in comparative mitochondrial physiology: mouse and trout heart and liver. Mitochondr Physiol Network 18.08.
|info=[[Flux control capacity]]
|info=[[Laner 2013 Mitochondr Physiol Network MiP2013|'''Bioblast Access - MiP2013 Book of Abstracts''']]
|authors=Gnaiger E
|authors=Krumschnabel G, Eigentler A, Fontana-Ayoub M, Draxl A, Fasching M, Gnaiger E
|year=2013
|year=2013
|event=MiP2013
|event=MiPNet18.08_MiP2013
|abstract=[[File:Gnaiger Erich.jpg|120px|right|Erich Gnaiger]]
|abstract=OXPHOS analysis is based on measurement of mitochondrial (mt) respiration in various steady-states of substrate supply and coupling of electron transfer to phosphorylation of ADP. To secure full accessibility of any flux control variables (substrates, ADP, etc.) to the mt organelle, mitochondria are either isolated from their cellular containment or plasma membranes are mechanically or chemically permeabilized. However, while permeabilized muscle fibers represent excellent mt-preparations, they require incubation at artificially high oxygen levels to avoid oxygen diffusion limitation [1]. On the other hand, mt-H2O2 production is oxygen dependent over a wide range of oxygen pressure [2]. Uncontrolled oxygen gradients in permeabilized muscle fibers, therefore, argue against application of this model for the combined study of ROS production and respiration. A high-quality preparation of tissue homogenate could eliminate diffusion restrictions and thus the need for elevated oxygen levels. This may provide an optimum compromise for a variety of respirometric and fluorometric studies. Therefore, we evaluated the PBI-Shredder as an auxiliary HRR-tool for a standardized preparation of homogenates from various tissues and species.
Analysis of oxidative phosphorylation (OXPHOS) is a component of mitochondrial phenotyping. OXPHOS analysis is based on measurement of respiration in various steady-states of substrate supply and coupling of electron transfer to phosphorylation of ADP [1]. Mitochondrial respiration is conventionally normalized for mitochondrial (mt) markers such as mt-protein or citrate synthase (CS). No rationale is available to suggest a universal best mitochondrial marker. A general normalization of mt-respiration is presented here.  
In the present study we applied high-resolution respirometry (HRR) to characterize and compare homogenate preparations from heart and liver of trout and mouse at the respective physiologically relevant temperature of 15 °C and 37 °C [3]. In trout heart and liver biochemical coupling efficiency with Complex I (CI)-linked substrates was identical in the two tissues. CI-linked substrate control capacity (OXPHOS) was higher whereas CII-linked succinate control capacity was lower in heart than liver. Pyruvate enhanced glutamate+malate stimulated OXPHOS capacity to a larger extent in heart than liver. The ADP-ATP phosphorylation system exerted a higher control over OXPHOS (CI+II) in heart than liver, making trout heart in this respect a better mt-model for human mt-cardiac function [4] than mouse heart. Mouse heart and liver homogenates were measured at 37 °C using an identical substrate-uncoupler-inhibitor titration (SUIT) protocol. The cytochrome c test (<5% stimulation in healthy controls) indicated outer mt-membrane integrity in all cases, following an optimization of the PBI-Shredder application with high reproducibility of complete mt-yield and preservation of mitochondrial respiratory control compared to permeabilized fibers.
|keywords=[[MiP2013]]
|mipnetlab=AT Innsbruck Oroboros , AT Innsbruck MitoCom
}}
== Abstract continued ==
In mouse heart homogenate, oxygen consumption and hydrogen peroxide production were monitored simultaneously by the modular extension of the Oroboros Oxygraph-2k with the O2k-Fluorescence LED2-Module and application of Amplex Ultrared using minimum amounts of tissue (2 mg wet weight per chamber). The oxygen-independent range was significantly extended in homogenate compared to permeabilized fibers. H2O2 production showed a reversible dependence on oxygen concentration that exceeded by far the effects of various substrate and coupling control states on the rate of hydrogen peroxide formation, in striking contrast to mouse brain mitochondria [5].


The remarkable species- and tissue-specific diversity of OXPHOS (substrate and coupling) control patterns will be discussed in relation to selecting appropriate models for comparative mitochondrial physiology and pathology, and for a variety of O2k-MultiSensor protocols applied for functional diagnosis of mitochondrial performance. The fast and reproducible mt-preparation in tissue homogenates opens up new perspectives for comparative mitochondrial physiology.


'''[[Flux control ratio]]s''', ''j'', are oxygen fluxes normalized relative to a common respiratory reference state [2]. For a given protocol or set of respiratory protocols, flux control ratios provide a fingerprint of coupling and substrate control independent of (i) mt-content of cells or tissues, (ii) purification in preparations of isolated mitochondria, and (iii) assay conditions for determination of tissue mass or mt-markers external to a respiratory protocol (CS, protein, stereology, etc.).
__TOC__


== Figures ==
For the figures see pdf [[Laner 2013 Mitochondr Physiol Network MiP2013|MiP2013 Book of Abstracts: pp 26-27''']]


Complementary to the concept of flux control ratios and analogous to elasticities of metabolic control analysis [3], '''[[Flux control capacity|flux control capacities]]''' express the control of respiration by a specific metabolic variable, ''X'', as a dimensionless (normalized) fractional change of flux, Δ''j''. ''Z'' is the reference sate with high (stimulated or un-inhibited) flux; ''Y'' is the background state at low flux, upon which ''X'' acts (''j<sub>Y</sub>''=''Y/Z''); ''X'' is either added (stimulation, activation) or removed (reversal of inhibition) to yield a flux ''Z'' from background ''Y''. Note that ''X'', ''Y'' and ''Z'' denote both, the metabolic control variable (''X'') or respiratory state (''Y, Z'') and the corresponding respiratory flux, ''X''=''Z-Y''. Experimentally, inhibitors are added rather than removed; then ''Z'' is the reference state and ''Y'' the background state in the presence of the inhibitor. The flux control capacity of ''X'' upon background ''Y'' is expressed as the change of flux from ''Y'' to ''Z'', normalized for the reference state ''Z'':
== Affiliations, acknowledgements and author contributions ==
1 - Oroboros Instruments, Schöpfstr. 18, Innsbruck, Austria;


2 -Daniel Swarovski Research Laboratory, Department of Visceral, Transplant and Thoracic Surgery, Medical University of Innsbruck, Austria.


:: Δ''j<sub>Z-Y</sub>'' = (''Z-Y'')/''Z'' = 1-''j<sub>Y</sub>''
Supported by K-Regio project ''[[MitoCom_O2k-Fluorometer| MitoCom Tyrol]]''.




Substrate control capacities express the relative change of oxygen flux in response to a transition of substrate availability in a defined coupling state. Coupling and phosphorylation control capacities are determined in an [[Substrate control state|ETS-competent substrate state]].


== References ==
# [[Gnaiger 2003 Adv Exp Med Biol|Gnaiger E (2003) Oxygen conformance of cellular respiration. A perspective of mitochondrial physiology. Adv Exp Med Biol 543: 39-55.]]
# [[Boveris 1973 Biochem J|Boveris A, Chance B (1973) The mitochondrial generation of hydrogen peroxide. General properties and effect of hyperbaric oxygen. Biochem J 134: 707-716.]]
# [[MiPNet17.03 Shredder vs Fibers|Doerrier CV, Draxl A, Wiethüchter A, Eigentler A, Gnaiger E (2013) Mitochondrial respiration in permeabilized fibers versus homogenate from fish liver and heart. An application study with the PBI-Shredder. Mitochondr Physiol Network 17.03 V3: 1-12.]]
# [[Lemieux 2011 Int J Biochem Cell Biol|Lemieux H, Semsroth S, Antretter H, Höfer D, Gnaiger E (2011) Mitochondrial respiratory control and early defects of oxidative phosphorylation in the failing human heart. Int J Biochem Cell Biol 43: 1729–1738.]]
# [http://www.oroboros.at/?h2o2_brain-mitochondria Fasching M, Sumbalova Z, Gnaiger E (2013) O2k-Fluorometry: HRR and H2O2 production in mouse brain mitochondria. Mitochondr Physiol Network 17.17 V2: 1-4.]


In the present study with high-resolution respirometry, mitochondrial respiratory control was compared in trout heart and liver tissue homogenate preparations at 15 °C [4]. Phosphorylation control capacities, i.e. [[LEAK]] (''Y''=''L'') to [[OXPHOS]] state (''Z''=''P''), with Complex I (CI)-linked substrates were identical in the two tissues. The ADP-ATP phosphorylation system exerted a higher control over OXPHOS in heart than liver. CI-linked substrate control capacity (OXPHOS) was higher whereas CII-linked succinate control capacity was lower in heart than liver. Pyruvate added to glutamate+malate stimulated OXPHOS capacity to a larger extent in heart than liver. Normalization of respiration in terms of flux control capacities is generally applicable to mitochondrial preparations and intact cells, eliminating any errors in separate measurements of mitochondrial markers.
|mipnetlab=AT Innsbruck Gnaiger E, AT Innsbruck OROBOROS, AT Innsbruck MitoCom
}}
{{Labeling
{{Labeling
|area=Respiration, Instruments;methods, Comparative MiP;environmental MiP
|area=Respiration, Instruments;methods, Comparative MiP;environmental MiP
|organism=Mouse
|organism=Mouse, Fishes
|taxonomic group=Fishes
|tissues=Heart, Nervous system, Liver
|tissues=Heart, Liver
|preparations=Homogenate
|preparations=Homogenate
|topics=ADP, Coupling efficiency;uncoupling, Cyt c, Flux control, Threshold;excess capacity
|topics=Coupling efficiency;uncoupling, Cyt c
|couplingstates=LEAK, OXPHOS, ETS
|couplingstates=LEAK, OXPHOS, ET
|substratestates=CI, CII, CI+II, ROX
|pathways=N, S, NS, ROX
|instruments=Oxygraph-2k, Theory
|instruments=Oxygraph-2k, O2k-Fluorometer
|additional=MiP2013, S02
|additional=MiP2013, PBI-Shredder
}}
}}
__TOC__
== Affiliations, acknowledgements and author contributions ==
Daniel Swarovski Research Laboratory, Department of Visceral, Transplant and Thoracic Surgery, Medical University of Innsbruck;
OROBOROS INSTRUMENTS, Schöpfstr. 18, Innsbruck, Austria
Email:
erich.gnaiger@oroboros.at
Supported by K-Regio project ''[[MitoCom Tyrol]]''. I thank Anna Draxl for excellent experimental assistance.
== References ==
# [[Gnaiger 2012 MitoPathways|Gnaiger E (2012) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 3rd ed. Mitochondr Physiol Network 17.18. OROBOROS MiPNet Publications, Innsbruck: 64 pp.]]
# [[Gnaiger 2009 Int J Biochem Cell Biol|Gnaiger E (2009) Capacity of oxidative phosphorylation in human skeletal muscle. New perspectives of mitochondrial physiology. Int J Biochem Cell Biol 41: 1837–1845.]]
# Fell D (1997) Understanding the control of metabolism. Portland Press, London.
# [[MiPNet17.03 Shredder vs Fibres|Doerrier CV, Draxl A, Wiethüchter A, Eigentler A, Gnaiger E (2013) Mitochondrial respiration in permeabilized fibres versus homogenate from fish liver and heart. An application study with the PBI-Shredder. Mitochondr Physiol Network 17.03 V3: 1-12.]]

Latest revision as of 18:28, 10 January 2022

Krumschnabel G, Eigentler A, Fontana-Ayoub M, Draxl A, Fasching M, Gnaiger E (2013) Tissue homogenates for respiratory OXPHOS analysis in comparative mitochondrial physiology: mouse and trout – heart and liver. Mitochondr Physiol Network 18.08.

Link: Bioblast Access - MiP2013 Book of Abstracts

Krumschnabel G, Eigentler A, Fontana-Ayoub M, Draxl A, Fasching M, Gnaiger E (2013)

Event: MiPNet18.08_MiP2013

OXPHOS analysis is based on measurement of mitochondrial (mt) respiration in various steady-states of substrate supply and coupling of electron transfer to phosphorylation of ADP. To secure full accessibility of any flux control variables (substrates, ADP, etc.) to the mt organelle, mitochondria are either isolated from their cellular containment or plasma membranes are mechanically or chemically permeabilized. However, while permeabilized muscle fibers represent excellent mt-preparations, they require incubation at artificially high oxygen levels to avoid oxygen diffusion limitation [1]. On the other hand, mt-H2O2 production is oxygen dependent over a wide range of oxygen pressure [2]. Uncontrolled oxygen gradients in permeabilized muscle fibers, therefore, argue against application of this model for the combined study of ROS production and respiration. A high-quality preparation of tissue homogenate could eliminate diffusion restrictions and thus the need for elevated oxygen levels. This may provide an optimum compromise for a variety of respirometric and fluorometric studies. Therefore, we evaluated the PBI-Shredder as an auxiliary HRR-tool for a standardized preparation of homogenates from various tissues and species. In the present study we applied high-resolution respirometry (HRR) to characterize and compare homogenate preparations from heart and liver of trout and mouse at the respective physiologically relevant temperature of 15 °C and 37 °C [3]. In trout heart and liver biochemical coupling efficiency with Complex I (CI)-linked substrates was identical in the two tissues. CI-linked substrate control capacity (OXPHOS) was higher whereas CII-linked succinate control capacity was lower in heart than liver. Pyruvate enhanced glutamate+malate stimulated OXPHOS capacity to a larger extent in heart than liver. The ADP-ATP phosphorylation system exerted a higher control over OXPHOS (CI+II) in heart than liver, making trout heart in this respect a better mt-model for human mt-cardiac function [4] than mouse heart. Mouse heart and liver homogenates were measured at 37 °C using an identical substrate-uncoupler-inhibitor titration (SUIT) protocol. The cytochrome c test (<5% stimulation in healthy controls) indicated outer mt-membrane integrity in all cases, following an optimization of the PBI-Shredder application with high reproducibility of complete mt-yield and preservation of mitochondrial respiratory control compared to permeabilized fibers.

Keywords: MiP2013

O2k-Network Lab: AT Innsbruck Oroboros, AT Innsbruck MitoCom


Abstract continued

In mouse heart homogenate, oxygen consumption and hydrogen peroxide production were monitored simultaneously by the modular extension of the Oroboros Oxygraph-2k with the O2k-Fluorescence LED2-Module and application of Amplex Ultrared using minimum amounts of tissue (2 mg wet weight per chamber). The oxygen-independent range was significantly extended in homogenate compared to permeabilized fibers. H2O2 production showed a reversible dependence on oxygen concentration that exceeded by far the effects of various substrate and coupling control states on the rate of hydrogen peroxide formation, in striking contrast to mouse brain mitochondria [5].

The remarkable species- and tissue-specific diversity of OXPHOS (substrate and coupling) control patterns will be discussed in relation to selecting appropriate models for comparative mitochondrial physiology and pathology, and for a variety of O2k-MultiSensor protocols applied for functional diagnosis of mitochondrial performance. The fast and reproducible mt-preparation in tissue homogenates opens up new perspectives for comparative mitochondrial physiology.

Figures

For the figures see pdf MiP2013 Book of Abstracts: pp 26-27

Affiliations, acknowledgements and author contributions

1 - Oroboros Instruments, Schöpfstr. 18, Innsbruck, Austria;

2 -Daniel Swarovski Research Laboratory, Department of Visceral, Transplant and Thoracic Surgery, Medical University of Innsbruck, Austria.

Supported by K-Regio project MitoCom Tyrol.


References

  1. Gnaiger E (2003) Oxygen conformance of cellular respiration. A perspective of mitochondrial physiology. Adv Exp Med Biol 543: 39-55.
  2. Boveris A, Chance B (1973) The mitochondrial generation of hydrogen peroxide. General properties and effect of hyperbaric oxygen. Biochem J 134: 707-716.
  3. Doerrier CV, Draxl A, Wiethüchter A, Eigentler A, Gnaiger E (2013) Mitochondrial respiration in permeabilized fibers versus homogenate from fish liver and heart. An application study with the PBI-Shredder. Mitochondr Physiol Network 17.03 V3: 1-12.
  4. Lemieux H, Semsroth S, Antretter H, Höfer D, Gnaiger E (2011) Mitochondrial respiratory control and early defects of oxidative phosphorylation in the failing human heart. Int J Biochem Cell Biol 43: 1729–1738.
  5. Fasching M, Sumbalova Z, Gnaiger E (2013) O2k-Fluorometry: HRR and H2O2 production in mouse brain mitochondria. Mitochondr Physiol Network 17.17 V2: 1-4.


Labels: MiParea: Respiration, Instruments;methods, Comparative MiP;environmental MiP 


Organism: Mouse, Fishes  Tissue;cell: Heart, Nervous system, Liver  Preparation: Homogenate 

Regulation: Coupling efficiency;uncoupling, Cyt c  Coupling state: LEAK, OXPHOS, ET  Pathway: N, S, NS, ROX  HRR: Oxygraph-2k, O2k-Fluorometer 

MiP2013, PBI-Shredder