O2k-Publications: Topics

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O2k-Publications: Topics

Mitochondria and Cell Research
O2k-Publications: chronological
Publications in the MiPMap


» Recent O2k-Publications
» O2k-Publications - chronological: 3467


Mitochondrial physiology: MiP areas

# O2k-Publications MitoPedia: Comment O2k Total
1 mt-Medicine (332 entries) 332 453
2 Exercise physiology;nutrition;life style 579 766
3 Comparative MiP;environmental MiP 277 409
4 Pharmacology;toxicology 556 657
5 mt-Biogenesis;mt-density 227 298
6 Genetic knockout;overexpression 450 508
7 Instruments;methods 203 299


Pathological states

Alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Aging;senescence 214 321
2 Alzheimer's 55 74
3 Autism 2 4
4 Cancer 273 363
5 Cardiovascular 135 174
6 COPD 8 10
7 Diabetes 268 349
8 Inherited 51 71
9 Infectious 26 31
10 Myopathy 52 61
11 Neurodegenerative 135 182
12 Obesity 173 234
13 Parkinson's 52 81
14 Sepsis 55 64
15 Other 192 254


Stress conditions

Alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Cell death White, brown, beige fat tissue 74 124
2 Cryopreservation 32 55
3 Hypoxia 63 91
4 Ischemia-reperfusion 276 377
5 Oxidative stress;RONS 490 688
6 Permeability transition 54 73
7 Temperature: hypothermia; hyperthermia 82 99


Organisms

Mammals
# O2k-Publications MitoPedia: Comment O2k Total
1 Human 1079 1469
2 Pig 75 87
3 Horse 22 28
4 Bovines 20 62
5 Cat 2 3
6 Dog 11 28
7 Rabbit 16 20
8 Mouse 963 1158
9 Rat 709 924
10 Guinea pig 18 31
11 Other mammals including only mammals that are not listed as mammalian species above 43 71
Model organisms
# O2k-Publications MitoPedia: Comment O2k Total
1 Chicken Birds) 3 4
2 Zebrafish Fishes) 9 14
3 Drosophila Hexapods) 47 61
4 Caenorhabditis elegans Nematodes) 13 20
5 Artemia Crustaceans) 11 18
6 Saccharomyces cerevisiae Fungi) 52 70
7 Comparative MiP 277 409


Non-mammals
# O2k-Publications MitoPedia: Comment O2k Total
1 Birds Chicken) 10 20
2 Reptiles turtles, lizards, snakes, crocodiles, alligators 10 14
3 Amphibians frogs, toads, salamanders 9 13
4 Fishes bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); » Zebrafish 93 122
5 Hexapods insects, springtails; » Drosophila 26 35
6 Crustaceans crabs, shrimp, barnacles, etc.; » Artemia 18 36
7 Annelids polychaetes, e.g. lugworm Arenicola marina, oligochaetes, leeches 3 16
8 Molluscs gastropods, cephalopods, bivalves 17 27
9 Nematodes » Caenorhabditis elegans 3 8
10 Other invertebrates urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ... 11 15
11 Fungi yeast, molds, mushrooms, etc.; » Saccharomyces cerevisiae 50 61
12 Plants 25 44
13 Protists amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc. 26 38
14 Eubacteria true bacteria, cyanobacteria, spirochetes 19 35
15 Archaea archaebacteria 0 6


Tissues and cells

Tissues - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Fat White, brown, beige fat tissue 132 163
2 Genital 71 100
3 Heart 557 729
4 Kidney 108 135
5 Liver 507 658
6 Lung;Gill 40 52
7 Nervous system 477 572
8 Skeletal muscle 847 1041


Cell types - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Blood cells 185 232
2 Endothelial;epithelial;mesothelial cell 192 221
3 Fibroblast 160 205
4 Islet cell;pancreas;thymus 39 49
5 Lymphocyte 49 62
6 Platelet 88 104
7 Stem cells 24 34


Cell lines - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 CHO 13 13
2 HEK 64 81
3 HeLa 25 38
4 Neuroblastoma 27 30
5 HUVEC 19 22
6 Macrophage-derived cell lines 22 31
7 Other cells and cell lines 251 288


Preparations

# O2k-Publications MitoPedia: Comment O2k Total
1 Living organism 38 108
2 Intact organ 21 32
3 Living cells 823 918
4 Permeabilized cells 486 514
5 Permeabilized tissue 852 928
6 Homogenate 258 291
7 Isolated mitochondria 983 1243
8 SMP Submitochondrial particles 10 22
9 Chloroplasts 1 9
10 Enzyme 38 67
11 Oxidase and biochemical oxidation 36 46


Enzymes

Alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Adenine nucleotide translocase ANT 20 23
2 Complex I CI 397 480
3 Complex II;succinate dehydrogenase CII 351 419
4 Complex III CIII 266 310
5 Complex IV;cytochrome c oxidase CIV 365 431
6 Complex V;ATP synthase CV 191 229
7 mt-Inner membrane transporter 29 41
8 Marker enzyme 48 69
9 Supercomplex 38 50
10 TCA cycle and matrix dehydrogenases Tricarboxylic acid cycle 67 86
11 Uncoupling protein 53 58


Regulation

Alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 ADP ADP kinetics 143 184
2 ATP production 60 92
3 Aerobic glycolysis 39 74
4 Amino acid 9 18
5 Calcium 68 100
6 Coupling efficiency;uncoupling 70 128
7 Cyt c Cytochrome c 38 46
8 Fatty acid FA substrate kinetics 111 133
9 Flux control 44 69
10 Inhibitor Inhibitor kinetics 126 154
11 Ion;substrate transport 47 86
12 mt-Membrane potential Mitochondrial membrane potential
Questions.jpg


Click to expand or collaps
» Keywords: Force and membrane potential
Fundamental relationships
» Force
» Affinity
» Flux
» Advancement
» Advancement per volume
» Stoichiometric number
mt-Membrane potential and protonmotive force
» Protonmotive force
» Mitochondrial membrane potential
» Chemical potential
» Faraday constant
» Format
» Uncoupler
O2k-Potentiometry
» O2k-Catalogue: O2k-TPP+ ISE-Module
» O2k-Manual: MiPNet15.03 O2k-MultiSensor-ISE
» TPP - O2k-Procedures: Tetraphenylphosphonium
» Specifications: MiPNet15.08 TPP electrode
» Poster
» Unspecific binding of TPP+
» TPP+ inhibitory effect
O2k-Fluorometry
» O2k-Catalogue: O2k-FluoRespirometer
» O2k-Manual: MiPNet22.11 O2k-FluoRespirometer manual
» Safranin - O2k-Procedures: MiPNet20.13 Safranin mt-membranepotential / Safranin
» TMRM - O2k-Procedures: TMRM
O2k-Publications
» O2k-Publications: mt-Membrane potential
» O2k-Publications: Coupling efficiency;uncoupling


83 131
13 Oxygen kinetics 89 120
14 Q-junction effect 6 7
15 Redox state 44 68
16 Substrate Fuel substrate kinetics 170 221
17 Temperature Temperature dependence 55 78
18 Threshold;excess capacity 27 30
19 Uncoupler Uncoupler kinetics 52 67


Coupling control states

# O2k-Publications MitoPedia: Coupling control states Comment O2k Total
1 P OXPHOS OXPHOS capacity Oxidative phosphorylation capacity, saturating [ADP] 2098 2283
2 R ROUTINE ROUTINE respiration Physiological state, living cells 628 686
3 E ET ET-capacity Maximal noncoupled respiration 1431 1512
4 L LEAK LEAK respiration Resting state, non-phosphorylating respiration 1730 1851


Pathway control states

# O2k-Publications MitoPedia: Electron transfer-pathway states Comment O2k Total
1 F F-pathway control state Fatty acid oxidation, level 5 431 524
2 N N-pathway control state NADH-linked, level 4 1726 1832
3 S S-pathway control state Succinate-linked, level 3 1167 1236
4 Gp Gp-pathway control state Glycerophosphate-linked, level 3 102 119
5 DQ Duorquinol-linked, level 2 15 18
6 CIV Complex IV single step Ascorbate & TMPD, level 1 489 514
7 NS NS-pathway control state Convergent CI- and CII-linked electron flow to the Q-junction 1062 1104
8 Other 121 136
9 ROX ROX Residual oxygen consumption includes non-mitochondrial respiration 961 1002


MiPMap combinations - examples

Examples for specific combinations
# O2k-Publications MitoPedia: Comment O2k Total
1 O2k-Publications: Human skeletal muscle 847 1041
2 O2k-Publications: Human heart 557 729
3 O2k-Publications: Skeletal muscle - human vs mouse 35 43
Browse data


O2k-Manuals and protocols and specific instrumental applications

# O2k-Publications MitoPedia: Comment O2k Total
1 Oxygraph-2k 3467 3467
2 TIP2k 41 41
3 O2k-Fluorometry 205 210
4 O2k-pH ISE-Module pH
Questions.jpg


Click to expand or collaps


4 5
5 Nitric Oxide 11 11
6 TPP+ ISE-Module Tetraphenylphosphonium
Questions.jpg


Click to expand or collaps
» Keywords: Force and membrane potential
Fundamental relationships
» Force
» Affinity
» Flux
» Advancement
» Advancement per volume
» Stoichiometric number
mt-Membrane potential and protonmotive force
» Protonmotive force
» Mitochondrial membrane potential
» Chemical potential
» Faraday constant
» Format
» Uncoupler
O2k-Potentiometry
» O2k-Catalogue: O2k-TPP+ ISE-Module
» O2k-Manual: MiPNet15.03 O2k-MultiSensor-ISE
» TPP - O2k-Procedures: Tetraphenylphosphonium
» Specifications: MiPNet15.08 TPP electrode
» Poster
» Unspecific binding of TPP+
» TPP+ inhibitory effect
O2k-Fluorometry
» O2k-Catalogue: O2k-FluoRespirometer
» O2k-Manual: MiPNet22.11 O2k-FluoRespirometer manual
» Safranin - O2k-Procedures: MiPNet20.13 Safranin mt-membranepotential / Safranin
» TMRM - O2k-Procedures: TMRM
O2k-Publications
» O2k-Publications: mt-Membrane potential
» O2k-Publications: Coupling efficiency;uncoupling


47 51
7 Calcium 9 9
8 O2k- Spectrophotometer 9 9
9 O2k-Manual 23 24
8 O2k-Protocol 68 85
9 Theoretical background 12 65
10 Instruments;methods 203 299
11 O2k-Fluorometry - Fluorophores 126 126
12 PBI Shredder Homogenate preparation 21 22
# O2k-Publications MitoPedia: Comment O2k Total
1 Twin-Flow respirometry 0 21
2 Separate DatLab applications 25 31