Difference between revisions of "MitoPedia"
From Bioblast
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'''»[[Bioblast Glossary: Terms and abbreviations]]''' - IUPAC guidelines are followed for general terms of physical chemistry<ref>Cohen ER, Cvitas T, Frey JG, Holmström B, Kuchitsu K, Marquardt R, Mills I, Pavese F, Quack M, Stohner J, Strauss HL, Takami M, Thor HL (2008) Quantities, Units and Symbols in Physical Chemistry, IUPAC Green Book, 3rd Edition, 2nd Printing, IUPAC & RSC Publishing, Cambridge. [[Cohen 2008 IUPAC Green Book |»Open Access]]</ref>,<ref>International Union of Biochemistry and Molecular Biology: Recommendations for terminology and databases for biochemical thermodynamics. [http://www.chem.qmul.ac.uk/iubmb/thermod2/ »Open Access]</ref>,<ref>International Union of Biochemistry (1981) Symbolism and terminology in enzyme kinetics. [http://www.chem.qmul.ac.uk/iubmb/kinetics/ »Open Access]</ref>, extended by concepts of nonequilibrium thermodynamics.<ref>Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65: 1983-2002. [[Gnaiger 1993 Pure Appl Chem |»Open Access]]</ref>. | '''»[[Bioblast Glossary: Terms and abbreviations]]''' - IUPAC guidelines are followed for general terms of physical chemistry<ref>Cohen ER, Cvitas T, Frey JG, Holmström B, Kuchitsu K, Marquardt R, Mills I, Pavese F, Quack M, Stohner J, Strauss HL, Takami M, Thor HL (2008) Quantities, Units and Symbols in Physical Chemistry, IUPAC Green Book, 3rd Edition, 2nd Printing, IUPAC & RSC Publishing, Cambridge. [[Cohen 2008 IUPAC Green Book |»Open Access]]</ref>,<ref>International Union of Biochemistry and Molecular Biology: Recommendations for terminology and databases for biochemical thermodynamics. [http://www.chem.qmul.ac.uk/iubmb/thermod2/ »Open Access]</ref>,<ref>International Union of Biochemistry (1981) Symbolism and terminology in enzyme kinetics. [http://www.chem.qmul.ac.uk/iubmb/kinetics/ »Open Access]</ref>, extended by concepts of nonequilibrium thermodynamics.<ref>Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65: 1983-2002. [[Gnaiger 1993 Pure Appl Chem |»Open Access]]</ref>. | ||
=== | === Bioblast Glossaries: Methods === | ||
: »[[ | : »[[Bioblast Glossary: Respirometry]] | ||
: »[[ | : »[[Bioblast Glossary: Fluorometry]] | ||
: »[[ | : »[[Bioblast Glossary: Spectrophotometry]] | ||
=== | === Bioblast Glossaries: Concepts === | ||
: »[[ | : »[[Bioblast Glossary: Respiratory states]]<ref> Gnaiger E (2012) Mitochondrial Pathways and Respiratory Control. An Introduction to OXPHOS Analysis. 3rd ed. Mitochondr Physiol Network 17.18. OROBOROS MiPNet Publications, Innsbruck: 64 pp. [[Gnaiger 2012 MitoPathways |»Open Access]]</ref> | ||
: »[[ | : »[[Bioblast Glossary: Respiratory control ratios]] | ||
: »[[Mitochondria and bioblasts: Made history]] | : »[[Mitochondria and bioblasts: Made history]] | ||
=== | === Bioblast Glossaries: Biochemistry === | ||
: »[[List of substrates and metabolites]]<ref> Pesta D, Gnaiger E (2012) High-resolution respirometry. OXPHOS protocols for human cells and permeabilized fibres from small biopisies of human muscle. Methods Mol Biol 810: 25-58. [[Pesta 2012 Methods Mol Biol |»Bioblast Access]]</ref> | : »[[List of substrates and metabolites]]<ref> Pesta D, Gnaiger E (2012) High-resolution respirometry. OXPHOS protocols for human cells and permeabilized fibres from small biopisies of human muscle. Methods Mol Biol 810: 25-58. [[Pesta 2012 Methods Mol Biol |»Bioblast Access]]</ref> | ||
: »[[List of uncouplers]] | : »[[List of uncouplers]] | ||
Revision as of 11:44, 16 May 2014
High-resolution terminology - matching measurements at high-resolution
The Bioblast Glossaries are continuously developing in the spirit of Gentle Science.
»Bioblast Glossary: Terms and abbreviations - IUPAC guidelines are followed for general terms of physical chemistry[1],[2],[3], extended by concepts of nonequilibrium thermodynamics.[4].
Bioblast Glossaries: Methods
- »Bioblast Glossary: Respirometry
- »Bioblast Glossary: Fluorometry
- »Bioblast Glossary: Spectrophotometry
Bioblast Glossaries: Concepts
- »Bioblast Glossary: Respiratory states[5]
- »Bioblast Glossary: Respiratory control ratios
- »Mitochondria and bioblasts: Made history
Bioblast Glossaries: Biochemistry
- »List of substrates and metabolites[6]
- »List of uncouplers
- »List of inhibitors
- »List of permeabilization agents
- »List of media for respirometry
- »List of enzymes[7]
Bioblast Glossaries: Links
- »List of Links - Mitochondria: Structure and Function
- »Mitochondrial Global Network: List of MitoGlobal Organizations
OROBOROS
- » List of OROBOROS MiPNet Protcols
- » List of O2k-Publications: Topics
References
- ↑ Cohen ER, Cvitas T, Frey JG, Holmström B, Kuchitsu K, Marquardt R, Mills I, Pavese F, Quack M, Stohner J, Strauss HL, Takami M, Thor HL (2008) Quantities, Units and Symbols in Physical Chemistry, IUPAC Green Book, 3rd Edition, 2nd Printing, IUPAC & RSC Publishing, Cambridge. »Open Access
- ↑ International Union of Biochemistry and Molecular Biology: Recommendations for terminology and databases for biochemical thermodynamics. »Open Access
- ↑ International Union of Biochemistry (1981) Symbolism and terminology in enzyme kinetics. »Open Access
- ↑ Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65: 1983-2002. »Open Access
- ↑ Gnaiger E (2012) Mitochondrial Pathways and Respiratory Control. An Introduction to OXPHOS Analysis. 3rd ed. Mitochondr Physiol Network 17.18. OROBOROS MiPNet Publications, Innsbruck: 64 pp. »Open Access
- ↑ Pesta D, Gnaiger E (2012) High-resolution respirometry. OXPHOS protocols for human cells and permeabilized fibres from small biopisies of human muscle. Methods Mol Biol 810: 25-58. »Bioblast Access
- ↑ International Union of Biochemistry (1991) Nomenclature of electron-transfer proteins. Biochim Biophys Acta 1060. »Open Access
