O2k-Publications: Topics: Difference between revisions
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See also >>> [[O2k-Publications|<big>All O2k-Publications: Chronological</big>]] | See also >>> [[O2k-Publications|<big>All O2k-Publications: Chronological</big>]] | ||
== Oxygraph-2k selected application | == Oxygraph-2k selected fields of application == | ||
* [[O2k-Publications: Mitochondrial medicine|mt-Medicine]], • [[O2k-Publications: Exercise physiology;nutrition;life style|Exercise physiology;nutrition;life style]], • [[O2k-Publications: Comparative MiP;environmental MiP|Comparative MiP;environmental MiP]], • [[O2k-Publications: Pharmacology;toxicology|Pharmacology;toxicology]] | * [[O2k-Publications: Mitochondrial medicine|mt-Medicine]], • [[O2k-Publications: Exercise physiology;nutrition;life style|Exercise physiology;nutrition;life style]], • [[O2k-Publications: Comparative MiP;environmental MiP|Comparative MiP;environmental MiP]], • [[O2k-Publications: Pharmacology;toxicology|Pharmacology;toxicology]] | ||
* [[O2k-Publications: mt-Biogenesis;mt-density|mt-Biogenesis;mt-density]], • [[O2k-Publications: Genetic knockout; overexpression|Genetic knockout;overexpression ]] | * [[O2k-Publications: mt-Biogenesis;mt-density|mt-Biogenesis;mt-density]], • [[O2k-Publications: Genetic knockout; overexpression|Genetic knockout;overexpression]] | ||
* [[O2k-Publications: Instruments;methods|Instruments;methods]] | * [[O2k-Publications: Instruments;methods|Instruments;methods]] | ||
Revision as of 18:50, 15 August 2013
See also >>> All O2k-Publications: Chronological
Oxygraph-2k selected fields of application
- mt-Medicine, • Exercise physiology;nutrition;life style, • Comparative MiP;environmental MiP, • Pharmacology;toxicology
- mt-Biogenesis;mt-density, • Genetic knockout;overexpression
- Instruments;methods
Organisms and tissues/cells
Mammals and models
- Human, • Pig, • Horse, • Cat, • Dog, • Rabbit, • Mouse, • Rat, • Guinea pig
- Other mammals: including only mammals that are not listed under mammals and model organisms.
- Chicken (>> Birds), • Zebrafish (>> Fishes), • Drosophila (>> Hexapods), • Caenorhabditis elegans (>> Nematodes), • Saccharomyces cerevisiae (>> Fungi)
- Artemia (>> Crustaceans)
Non-mammals
- Comparative MiP
- Birds (>> Chicken)
- Reptiles - turtles, lizards, snakes, crocodiles, alligators
- Amphibians - frogs, toads, salamanders
- Fishes - bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); >> Zebrafish
- Hexapods - insects, springtails; >> Drosophila
- Crustaceans - crabs, shrimp, barnacles, etc.; >> Artemia
- Annelids - polychaetes, e.g. lugworm Arenicola marina, oligochaetes, leeches
- Molluscs - gastropods, cephalopods, bivalves
- Nematodes >> Caenorhabditis elegans
- Other invertebrates - urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ...
- Fungi - yeast, molds, mushrooms, etc.; >> Saccharomyces cerevisiae
- Plants
- Protists - amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc.
- Eubacteria - true bacteria, cyanobacteria, spirochetes
- Archaea - archaebacteria
Tissues, cell types and cell lines
- Heart, • Skeletal muscle, • Nervous system, • Liver, • Kidney, • Lung; gill, • Fat, • Endothelial; Epithelial; Mesothelial Cell, • Islet Cell; Pancreas; Thymus, • Blood cells
- CHO, • HEK, • HeLa, • Neuroblastoma, • Fibroblast, • HUVEC, • Macrophage-derived cell lines, • Stem cells, • Other cell lines
Preparations
- Intact cells, • Permeabilized cells, • Permeabilized muscle fibres;tissue preparations, • Homogenate, • Isolated mitochondria, • Oxidase and biochemical oxidation
Stress conditions and pathological states
- Hypoxia, • Ischemia-reperfusion injury and preservation, • Oxidative stress;RONS
- Aging; senescence, • Cancer, • COPD, • Diabetes 2, • Parkinson's, • Alzheimer's, • Mitochondrial Disease; Degenerative Disease and Defect
Regulation
MiPMap combinations - examples
Examples for specific combinations are given for O2k-Publications:
- O2k-Publications: Human skeletal muscle
- O2k-Publications: Human heart
- O2k-Publications: Skeletal muscle - human vs mouse
O2k-Manuals and protocols
- OroboPedia: O2k-Manual, • Instruments;methods, • Theoretical Background, • OroboPedia: Protocols, Q-junction effect
Lately added/edited references and authors
- Liepinsh 2024 Br J Pharmacol
- Cocco 2024 BEC
- Test 2024 BEC
- Galkin Alexander
- Vinogradov Andrei D
- Barber 2018 World Scientific
- Margulis Lynn
- Cohn 1953 J Biol Chem
- Azzi 2024 BEC-Tributes
- Cohn Mildred
- Cohn 1960 J Biol Chem
- Cohn 1962 J Biol Chem
- Anderson Jan M
- Anderson 1975 Biochim Biophys Acta Reviews Bioenergetics
- Rostambeigi 2011 Transplantation
- Volek 2016 Metabolism
- Attardi Giuseppe
- Chow 2016 Photosynth Res
- Chow 2015 Trends Plant Sci
- Sagan 2012 Chelsea Green Publishing
- Prebble 2003 Oxford Univ Press
- Martin 1999 Eur J Phycol
- Margulis 1970 Yale University Press
- Leewenhoeck 1677 Phil Trans