Komlodi 2018 Methods Mol Biol

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Komlodi T, Sobotka O, Krumschnabel G, Bezuidenhout N, Hiller E, Doerrier C, Gnaiger E (2018) Comparison of mitochondrial incubation media for measurement of respiration and hydrogen peroxide production. Methods Mol Biol 1782:137-55.

» PMID:29850998

Komlodi Timea, Sobotka Ondrej, Krumschnabel Gerhard, Bezuidenhout N, Hiller Elisabeth, Doerrier Carolina, Gnaiger Erich (2018) Methods Mol Biol

Abstract: High-resolution respirometry is a well-established and versatile approach to study mitochondrial oxygen uptake amperometrically in combination with measurement of fluorescence signals. One of the most frequently applied fluorescent dyes is Amplex UltraRed for monitoring rates of hydrogen peroxide production. Selection of an appropriate mitochondrial respiration medium is of crucial importance, the primary role of which is to support and preserve optimum mitochondrial function. For harmonization of results in a common database, we compared respiration and H2O2 production of permeabilized HEK 293T cells measured in MiR05 (sucrose and K-lactobionate), Buffer Z (K-MES and KCl), MiR07 (combination of MiR05 and Buffer Z), and MiRK03 (KCl). Respiration in a simple substrate-uncoupler-inhibitor titration protocol was identical in MiR05, Buffer Z, and MiR07, whereas oxygen fluxes detected with MiRK03 were consistently lower in all coupling and electron transfer-pathway states. H2O2 production rates were comparable in all four media, while assay sensitivity was comparatively low with MiR05 and MiR07 and higher but declining over time in the other two media. Stability of assay sensitivity over experimental time was highest in MiR05 but slightly less in MiR07. Taken together, MiR05 and Buffer Z yield comparable results on respiration and H2O2 production. Despite the lower sensitivity, MiR05 was selected as the medium of choice for FluoRespirometry due to the highest stability of the sensitivity or calibration constant observed in experiments over periods of up to 2 h.

Keywords: Amplex UltraRed, high-resolution respirometry, Oxygraph-2k, Respiration media, Substrate-uncoupler-inhibitor titration, HEK 293T cells, Permeabilized muscle fibers, DTPA, Buffer z

O2k-Network Lab: AT Innsbruck Gnaiger E, AT Innsbruck Oroboros

Cited by

  • Komlódi T, Sobotka O, Gnaiger E (2021) Facts and artefacts on the oxygen dependence of hydrogen peroxide production using Amplex UltraRed. MitoFit Preprints 2021 (in prep). - Bioblast link
  • Komlodi T et al (2021) Oxygen dependence of hydrogen peroxide production using Amplex UltraRed in yeast cells, isolated mitochondria, and permeabilized cells. MitoFit Preprints 2021 (in prep).
  • Komlodi et al (2021) Hydrogen peroxide production, mitochondrial membrane potential and the redox state of the coenzyme Q measured at tissue normoxia and experimental hyperoxia in heart mitochondria. MitoFit Preprints 2021 (in prep)

Labels: MiParea: Respiration, Instruments;methods 

Organism: Human, Mouse  Tissue;cell: Skeletal muscle, HEK  Preparation: Permeabilized cells, Permeabilized tissue 

Coupling state: LEAK, OXPHOS, ET  Pathway: F, N, S, CIV, NS, ROX  HRR: Oxygraph-2k, O2k-Fluorometer, O2k-Protocol 

AmR, 2018-07, MitoEAGLEPublication, SUIT-009 AmR mt D021, SUIT-013, SUIT-013 AmR ce D023, SUIT-009 AmR pce D019, SUIT-018, SUIT-018 AmR mt D031, SUIT-006 AmR mt D048, SUIT-003 AmR ce D017, SUIT-003 AmR ce D058, MitoFit 2021 AmR, MitoFit 2021 Dark respiration, MitoFit 2021 Photosynthesis, MitoFit 2021 AmR-O2, MitoFit 2021 Tissue normoxia