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Debug output SQLStore
ASK Query
[[Category:Publications]] [[Pathways::S]]
SQL Query
SELECT DISTINCT
t0.smw_id AS id,
t0.smw_title AS t,
t0.smw_namespace AS ns,
t0.smw_iw AS iw,
t0.smw_subobject AS so,
t0.smw_sortkey AS sortkey, t7.o_hash
FROM
`smw_object_ids` AS t0
INNER JOIN
(`smw_fpt_inst` AS t2
INNER JOIN
`t3` AS t3 ON t2.o_id=t3.id
INNER JOIN
`smw_di_blob` AS t4 ON t2.s_id=t4.s_id) ON t0.smw_id=t2.s_id
INNER JOIN
`smw_di_blob` AS t7 ON t0.smw_id=t7.s_id
WHERE
(
((t4.o_hash='S') AND t4.p_id=80959)
)
AND (t7.p_id=80886)
AND t0.smw_iw!=':smw'
AND t0.smw_iw!=':smw-delete'
AND t0.smw_iw!=':smw-redi'
ORDER BY
t7.o_hash DESC
LIMIT
25
OFFSET
1000
t0.smw_id AS id,
t0.smw_title AS t,
t0.smw_namespace AS ns,
t0.smw_iw AS iw,
t0.smw_subobject AS so,
t0.smw_sortkey AS sortkey, t7.o_hash
FROM
`smw_object_ids` AS t0
INNER JOIN
(`smw_fpt_inst` AS t2
INNER JOIN
`t3` AS t3 ON t2.o_id=t3.id
INNER JOIN
`smw_di_blob` AS t4 ON t2.s_id=t4.s_id) ON t0.smw_id=t2.s_id
INNER JOIN
`smw_di_blob` AS t7 ON t0.smw_id=t7.s_id
WHERE
(
((t4.o_hash='S') AND t4.p_id=80959)
)
AND (t7.p_id=80886)
AND t0.smw_iw!=':smw'
AND t0.smw_iw!=':smw-delete'
AND t0.smw_iw!=':smw-redi'
ORDER BY
t7.o_hash DESC
LIMIT
25
OFFSET
1000
SQL Explain
ID | select_type | table | type | possible_keys | key | key_len | ref | rows | filtered | Extra |
---|---|---|---|---|---|---|---|---|---|---|
1 | SIMPLE | t3 | ALL | PRIMARY | 7 | 100.00 | Using temporary; Using filesort |
Auxilliary Tables
- Temporary table t3
Recursively computed hierarchy for element(s) (80971).
SELECT s_id FROM `smw_fpt_subc` WHERE o_id=80971 LIMIT 1
Query Metrics
Query-Size:3Query-Depth:1
Errors and Warnings
NoneYear | Reference | Coupling | Pathway | Preparation | Organism | Tissue;cell | |
---|---|---|---|---|---|---|---|
Thomas 2016 Neurodegeneration Therapeutics | 2016 | Thomas RR, Keeney PM, Berr SB, Khan SM, Portell FR, Shakenov MZ, Antkowiak PF, Kundu B, Tustison N, Brohawn DG, Bennett JP (2016) Recombinant human TFAM stimulates rat brain, rat cervical spinal cord and human neural stem cell mitochondrial bioenergetics. Neurodegeneration Therapeutics p41. | LEAK OXPHOS | N S CIV | Isolated mitochondria | Rat | Nervous system |
Gomez 2016 Thesis | 2016 | Gomez CR (2016) Mitochondrial responses to anoxia exposure in red eared sliders (Trachemys scripta). Master's Thesis p102. | LEAK OXPHOS ET | S | Permeabilized cells Isolated mitochondria | Reptiles | Heart Nervous system |
Lemieux 2016 Mitochondrion | 2016 | Lemieux H, Boemer F, van Galen G, Serteyn D, Amory H, Baise E, Cassart D, van Loon G, Marcillaud-Pitel C, Votion DM (2016) Mitochondrial function is altered in horse atypical myopathy. Mitochondrion 30:35-41. | OXPHOS ET | N S NS ROX | Permeabilized tissue | Horse | Skeletal muscle |
Richman 2016 Nat Commun | 2016 | Richman TR, SpΓ₯hr H, Ermer JA, Davies SM, Viola HM, Bates KA, Papadimitriou J, Hool LC, Rodger J, Larsson NG, Rackham O, Filipovska A (2016) Loss of the RNA-binding protein TACO1 causes late-onset mitochondrial dysfunction in mice. Nat Commun 7:11884. | LEAK OXPHOS | N S CIV | Isolated mitochondria | Mouse | Heart Liver |
Gariani 2016 Hepatology | 2016 | Gariani K, Menzies KJ, Ryu D, Wegner CJ, Wang X, Ropelle ER, Moullan N, Zhang H, Perino A, Lemos V, Kim B, Park YK, Piersigilli A, Pham TX, Yang Y, Ku SC, Koo SI, Fomitchova A, CantΓ³ C, Schoonjans K, Sauve AA, Lee JY, Auwerx J (2016) Eliciting the mitochondrial unfolded protein response via NAD+ repletion reverses fatty liver disease. Hepatology 63:1190-204. | OXPHOS | N S | Permeabilized tissue | Mouse | Liver |
Gregg 2016 Diabetes | 2016 | Gregg T, Poudel C, Schmidt BA, Dhillon RS, Sdao SM, Truchan NA, Baar EL, Fernandez LA, Denu JM, Eliceiri KW, Rogers JD, Kimple ME, Lamming DW, Merrins MJ (2016) Pancreatic Ξ² cells from mice offset age-associated mitochondrial deficiency with reduced KATP channel activity. Diabetes 65:2700-10. | LEAK OXPHOS ET | N S NS ROX | Permeabilized tissue | Human Mouse | Islet cell;pancreas;thymus Other cell lines |
Camacho-Pereira 2016 Cell Metab | 2016 | Camacho-Pereira J, TarragΓ³ MG, Chini CC, Nin V, Escande C, Warner GM, Puranik AS, Schoon RA, Reid JM, Galina A, Chini EN (2016) CD38 dictates age-related NAD decline and mitochondrial dysfunction through an SIRT3-dependent mechanism. Cell Metab 23:1127-39. | LEAK ROUTINE OXPHOS ET | S ROX | Isolated mitochondria Intact cells | Human Mouse | Liver Lung;gill Other cell lines |
Ryan 2016 Diabetes | 2016 | Ryan TE, Schmidt CA, Green TD, Spangenburg EE, Neufer PD, McClung JM (2016) Targeted expression of catalase to mitochondria protects against ischemic myopathy in high fat fed mice. Diabetes 65:2553-68. | LEAK OXPHOS ET | N S CIV Other combinations ROX | Isolated mitochondria | Mouse | Skeletal muscle |
Tam 2016 Eur J Appl Physiol | 2016 | Tam E, Bruseghini P, Calabria E, Sacco LD, Doria C, Grassi B, Pietrangelo T, Pogliaghi S, Reggiani C, Salvadego D, Schena F, Toniolo L, Verratti V, Vernillo G, Capelli C (2016) Gokyo Khumbu/Ama Dablam Trek 2012: effects of physical training and high-altitude exposure on oxidative metabolism, muscle composition, and metabolic cost of walking in women. Eur J Appl Physiol 116:129-44. | LEAK OXPHOS | N S NS ROX | Permeabilized tissue | Human | Skeletal muscle |
Lim 2016 FASEB J | 2016 | Lim SC, HroudovΓ‘ J, Van Bergen NJ, Lopez Sanchez MI, Trounce IA, McKenzie M (2016) Loss of mitochondrial DNA-encoded protein ND1 results in disruption of complex I biogenesis during early stages of assembly. FASEB J 30:2236-48. | OXPHOS ET | N S NS ROX | Permeabilized cells | Human | Other cell lines |
Wang 2016 Toxicol Sci | 2016 | Wang L, Espinoza HM, MacDonald JW, Bammler TK, Williams CR, Yeh A, Louie KW, Marcinek DJ, Gallagher EP (2016) Olfactory Transcriptional Analysis of Salmon Exposed to Mixtures of Chlorpyrifos and Malathion Reveal Novel Molecular Pathways of Neurobehavioral Injury. Toxicol Sci 149:145-57. | LEAK OXPHOS ET | N S CIV NS ROX | Permeabilized tissue | Fishes | Endothelial;epithelial;mesothelial cell |
Farsijani 2016 J Clin Invest | 2016 | Farsijani NM, Liu Q, Kobayashi H, Davidoff O, Sha F, Fandrey J, Ikizler TA, O'Connor PM, Haase VH (2016) Renal epithelium regulates erythropoiesis via HIF-dependent suppression of erythropoietin. J Clin Invest 126:1425-37. | LEAK OXPHOS | N S CIV ROX | Permeabilized tissue | Mouse | Nervous system |
Cannon 2016 Lung | 2016 | Cannon DT, Liu J, Sakurai R, Rossiter HB, Rehan VK (2016) Impaired lung mitochondrial respiration following perinatal nicotine exposure in rats. Lung 194:325-8. | LEAK OXPHOS ET | N S CIV NS | Permeabilized tissue | Rat | Lung;gill |
Hamilton 2016 Am J Physiol Heart Circ Physiol | 2016 | Hamilton DJ, Zhang A, Li S, Cao TN, Smith JA, Vedula I, Cordero-Reyes AM, Youker KA, Torre-Amione G, Gupte AA (2016) Combination of angiotensin II and l-NG-nitroarginine methyl ester exacerbates mitochondrial dysfunction and oxidative stress to cause heart failure. Am J Physiol Heart Circ Physiol 310:H667-80. | LEAK OXPHOS | F N S NS Other combinations ROX | Permeabilized tissue Isolated mitochondria | Mouse | Heart |
Du 2016 J Exp Biol | 2016 | Du SN, Mahalingam S, Borowiec BG, Scott GR (2016) Mitochondrial physiology and reactive oxygen species production are altered by hypoxia acclimation in killifish (Fundulus heteroclitus). J Exp Biol 219:1130-8. | LEAK OXPHOS ET | N S CIV NS | Isolated mitochondria | Fishes | Liver |
Ehinger 2016 Mov Disord | 2016 | Ehinger JK, Morota S, Hansson MJ, Gesine P, ElmΓ©r E (2016) Mitochondrial respiratory function in peripheral blood cells from Huntingtonβs disease patients. Mov Disord doi:10.1002/mdc3.12308. | LEAK ROUTINE OXPHOS ET | N S CIV NS Other combinations ROX | Permeabilized cells Intact cells | Human | Blood cells Lymphocyte Platelet |
Lores-Arnaiz 2016 Neurochem Res | 2016 | Lores-Arnaiz S, Lombardi P, Karadayian AG, Orgambide F, Cicerchia D, Bustamante J (2016) Brain cortex mitochondrial bioenergetics in synaptosomes and non-synaptic mitochondria during aging. Neurochem Res 41:353-63. | LEAK ROUTINE OXPHOS ET | N S | Isolated mitochondria Intact cells | Mouse | Nervous system |
Amaral 2016 J Neurochem | 2016 | Amaral AU, Cecatto C, Castilho RF, Wajner M (2016) 2-methylcitric acid impairs glutamate metabolism and induces permeability transition in brain mitochondria. J Neurochem 137:62-75. | LEAK OXPHOS ET | N S NS | Isolated mitochondria | Rat | Nervous system |
Pamenter 2016 Biol Lett | 2016 | Pamenter ME, Gomez CR, Richards JG, Milsom WK (2016) Mitochondrial responses to prolonged anoxia in brain of red-eared slider turtles. Biol Lett 12. pii: 20150797. | LEAK OXPHOS ET | N S CIV ROX | Permeabilized tissue | Reptiles | Nervous system |
Schoepf 2016 FEBS J | 2016 | SchΓΆpf B, SchΓ€fer G, Weber A, Talasz H, Eder IE, Klocker H, Gnaiger E (2016) Oxidative phosphorylation and mitochondrial function differ between human prostate tissue and cultured cells. https://doi.org/10.1111/febs.13733 | LEAK OXPHOS ET | F N S NS Other combinations ROX | Permeabilized cells Permeabilized tissue | Human | Endothelial;epithelial;mesothelial cell Genital Other cell lines Fibroblast |