Difference between revisions of "O2k-Publications: Topics"
From Bioblast
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[[Image:MiPMap Publication.jpg|right|300px|link=MiPMap|Publications in the MiPMap]] | [[Image:MiPMap Publication.jpg|right|300px|link=MiPMap|Publications in the MiPMap]] | ||
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See also >>> [[O2k-Publications|<big>O2k-Publications - chronological: {{#ask:[[Category:Publications]][[Instrument and method::Oxygraph-2k]] |format=count | See also >>> [[O2k-Publications|<big>O2k-Publications - chronological: {{#ask:[[Category:Publications]][[Instrument and method::Oxygraph-2k]] |format=count | ||
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== Mammals and models, other organisms == | == Mammals and models, other organisms == | ||
* [[O2k-Publications: Human|Human]] •• [[O2k-Publications: Pig|Pig]] •• [[O2k-Publications: Horse|Horse]] •• [[O2k-Publications: Bovines|Bovines]] •• [[O2k-Publications: Cat|Cat]] •• [[O2k-Publications: Dog|Dog]] •• [[O2k-Publications: Rabbit|Rabbit]] •• [[O2k-Publications: Mouse|Mouse]] •• [[O2k-Publications: Rat|Rat]] •• [[O2k-Publications: Guinea pig|Guinea pig]]•• [[O2k-Publications: Other mammals|Other mammals]] | * [[O2k-Publications: Human|Human]] •• [[O2k-Publications: Pig|Pig]] •• [[O2k-Publications: Horse|Horse]] •• [[O2k-Publications: Bovines|Bovines]] •• [[O2k-Publications: Cat|Cat]] •• [[O2k-Publications: Dog|Dog]] •• [[O2k-Publications: Rabbit|Rabbit]] •• [[O2k-Publications: Mouse|Mouse]] •• [[O2k-Publications: Rat|Rat]] •• [[O2k-Publications: Guinea pig|Guinea pig]]•• [[O2k-Publications: Other mammals|Other mammals]] | ||
* [[O2k-Publications: Chicken|Chicken]] •• [[O2k-Publications: Zebrafish|Zebrafish]] •• [[O2k-Publications: Drosophila|Drosophila]] •• [[O2k-Publications: Caenorhabditis elegans|Caenorhabditis elegans]] •• [[O2k-Publications: Artemia|Artemia]] •• [[O2k-Publications: Saccharomyces cerevisiae|Saccharomyces cerevisiae]] | * [[O2k-Publications: Chicken|Chicken]] •• [[O2k-Publications: Zebrafish|Zebrafish]] •• [[O2k-Publications: Drosophila|Drosophila]] •• [[O2k-Publications: Caenorhabditis elegans|Caenorhabditis elegans]] •• [[O2k-Publications: Artemia|Artemia]] •• [[O2k-Publications: Saccharomyces cerevisiae|Saccharomyces cerevisiae]] | ||
* [[O2k-Publications: Comparative MiP;environmental MiP|Comparative MiP]] •• [[O2k-Publications: Plants |Plants]] | * [[O2k-Publications: Comparative MiP;environmental MiP|Comparative MiP]] •• [[O2k-Publications: Plants |Plants]] | ||
* [[O2k-Publications: Organisms|Further information]] | * [[O2k-Publications: Organisms|Further information]] | ||
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== Tissues, cell types and cell lines == | == Tissues, cell types and cell lines == | ||
* [[O2k-Publications: Heart|Heart]] •• [[O2k-Publications: Skeletal muscle|Skeletal muscle]] •• [[O2k-Publications: Nervous system|Nervous system]] •• [[O2k-Publications: Liver|Liver]] •• [[O2k-Publications: Kidney|Kidney]] •• [[O2k-Publications: Lung; gill|Lung; gill]] •• [[O2k-Publications: Fat|Fat]] •• [[O2k-Publications: Genital|Genital]] •• [[O2k-Publications: Endothelial; Epithelial; Mesothelial Cell|Endothelial;epithelial;mesothelial cell]] •• [[O2k-Publications: Islet Cell; Pancreas; Thymus|Islet cell;pancreas;thymus]] •• [[O2k-Publications: Blood cells|Blood cells]] | * [[O2k-Publications: Heart|Heart]] •• [[O2k-Publications: Skeletal muscle|Skeletal muscle]] •• [[O2k-Publications: Nervous system|Nervous system]] •• [[O2k-Publications: Liver|Liver]] •• [[O2k-Publications: Kidney|Kidney]] •• [[O2k-Publications: Lung; gill|Lung; gill]] •• [[O2k-Publications: Fat|Fat]] •• [[O2k-Publications: Genital|Genital]] •• [[O2k-Publications: Endothelial; Epithelial; Mesothelial Cell|Endothelial;epithelial;mesothelial cell]] •• [[O2k-Publications: Islet Cell; Pancreas; Thymus|Islet cell;pancreas;thymus]] •• [[O2k-Publications: Blood cells|Blood cells]] | ||
* [[O2k-Publications: CHO|CHO]] •• [[O2k-Publications: HEK|HEK]] •• [[O2k-Publications: HeLa|HeLa]] •• [[O2k-Publications: Neuroblastoma|Neuroblastoma]] •• [[O2k-Publications: Fibroblast|Fibroblast]] •• [[O2k-Publications: HUVEC|HUVEC]] •• [[O2k-Publications: Macrophage-derived cell lines|Macrophage-derived cell lines]] •• [[O2k-Publications: Lymphocyte|Lymphocyte]] •• [[O2k-Publications: Platelet|Platelet]] •• [[O2k-Publications: Stem cells|Stem cells]] •• [[O2k-Publications: Other cell lines|Other cell lines]] | * [[O2k-Publications: CHO|CHO]] •• [[O2k-Publications: HEK|HEK]] •• [[O2k-Publications: HeLa|HeLa]] •• [[O2k-Publications: Neuroblastoma|Neuroblastoma]] •• [[O2k-Publications: Fibroblast|Fibroblast]] •• [[O2k-Publications: HUVEC|HUVEC]] •• [[O2k-Publications: Macrophage-derived cell lines|Macrophage-derived cell lines]] •• [[O2k-Publications: Lymphocyte|Lymphocyte]] •• [[O2k-Publications: Platelet|Platelet]] •• [[O2k-Publications: Stem cells|Stem cells]] •• [[O2k-Publications: Other cell lines|Other cell lines]] | ||
== Preparations == | == Preparations == | ||
* [[O2k-Publications: Intact Organism|Intact organism]] •• [[O2k-Publications: Intact Organ|Intact organ]] •• [[O2k-Publications: Intact cells|Intact cells]] •• [[O2k-Publications: Permeabilized cells|Permeabilized cells]] •• [[O2k-Publications: Permeabilized_tissue|Permeabilized tissue]] •• [[O2k-Publications: Homogenate|Homogenate]] •• [[O2k-Publications: Isolated Mitochondria|Isolated mitochondria]] •• [[O2k-Publications: SMP|SMP]] | * [[O2k-Publications: Intact Organism|Intact organism]] •• [[O2k-Publications: Intact Organ|Intact organ]] •• [[O2k-Publications: Intact cells|Intact cells]] •• [[O2k-Publications: Permeabilized cells|Permeabilized cells]] •• [[O2k-Publications: Permeabilized_tissue|Permeabilized tissue]] •• [[O2k-Publications: Homogenate|Homogenate]] •• [[O2k-Publications: Isolated Mitochondria|Isolated mitochondria]] •• [[O2k-Publications: SMP|SMP]] •• [[O2k-Publications: Chloroplasts|Chloroplasts]] •• [[O2k-Publications: Enzyme|Enzyme]] •• [[O2k-Publications: Oxidase; Biochemical Oxidation|Oxidase and biochemical oxidation]] | ||
== Regulation == | == Regulation == | ||
* [[O2k-Publications: | * [[O2k-Publications: ADP|ADP]] •• [[O2k-Publications: ATP production|ATP production]] •• [[O2k-Publications: Aerobic glycolysis|Aerobic glycolysis]] •• [[O2k-Publications: Amino acid|Amino acid]] •• [[O2k-Publications: Calcium|Calcium]] •• [[O2k-Publications: Coupling efficiency;uncoupling|Coupling efficiency;uncoupling]] •• [[O2k-Publications: Cyt c |Cyt c]] •• [[O2k-Publications: Fatty acid |Fatty acid]] •• [[O2k-Publications: Flux control|Flux control]] •• [[O2k-Publications: Inhibitor|Inhibitor]] •• [[O2k-Publications: Ion;substrate transport|Ion;substrate transport]] •• [[O2k-Publications: mt-Membrane potential |mt-Membrane potential ]] •• [[O2k-Publications: O2|O2]] [[O2k-Publications: Redox state|Redox state]] •• [[O2k-Publications: Temperature|Temperature]] •• [[O2k-Publications: Threshold;excess capacity|Threshold;excess capacity]]· [[O2k-Publications: Oxygen kinetics|Oxygen kinetics]] •• [[O2k-Publications: Substrate|Substrate]] •• [[O2k-Publications: Uncoupler|Uncoupler]]· | ||
== Enzymes == | == Enzymes == | ||
* [[O2k-Publications: Adenine nucleotide translocase|Adenine nucleotide translocase]] •• [[O2k-Publications: Complex I|Complex I]] •• [[O2k-Publications: Complex II;succinate dehydrogenase|Complex II;succinate dehydrogenase]] •• [[O2k-Publications: Complex III|Complex III]] •• [[O2k-Publications: Complex IV;cytochrome c oxidase|Complex IV;cytochrome c oxidase | * [[O2k-Publications: Adenine nucleotide translocase|Adenine nucleotide translocase]] •• [[O2k-Publications: Complex I|Complex I]] •• [[O2k-Publications: Complex II;succinate dehydrogenase|Complex II;succinate dehydrogenase]] •• [[O2k-Publications: Complex III|Complex III]] •• [[O2k-Publications: Complex IV;cytochrome c oxidase|Complex IV;cytochrome c oxidase]] •• [[O2k-Publications: Complex V;ATP synthase|Complex V;ATP synthase]] •• [[O2k-Publications: Inner mt-membrane transporter|Inner mt-membrane transporter]] •• [[O2k-Publications: Marker enzyme|Marker enzyme]] •• [[O2k-Publications: Supercomplex|Supercomplex]] •• [[O2k-Publications: TCA cycle and matrix dehydrogenases|TCA cycle and matrix dehydrogenases]] •• [[O2k-Publications: Uncoupling protein|Uncoupling protein]] | ||
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* [[O2k-Manual]] •• [[O2k-Publications: Instruments;methods|Instruments;methods]] •• [[O2k-Publications: TIP2k|TIP2k]] •• [[O2k-Publications: O2k-Fluorometry|O2k-Fluorometry]] •• [[O2k-Publications: Theoretical Background|Theoretical background]] •• [[O2k-Protocols]] •• [[O2k-Publications: Q-Junction Effect|Q-junction effect]] | * [[O2k-Manual]] •• [[O2k-Publications: Instruments;methods|Instruments;methods]] •• [[O2k-Publications: TIP2k|TIP2k]] •• [[O2k-Publications: O2k-Fluorometry|O2k-Fluorometry]] •• [[O2k-Publications: Theoretical Background|Theoretical background]] •• [[O2k-Protocols]] •• [[O2k-Publications: Q-Junction Effect|Q-junction effect]] | ||
* [[O2k-Publications:_Twin-Flow_Respirometry|Twin-Flow respirometry]] •• [[O2k-Publications: Separate DatLab Applications|Separate DatLab applications]] | * [[O2k-Publications:_Twin-Flow_Respirometry|Twin-Flow respirometry]] •• [[O2k-Publications: Separate DatLab Applications|Separate DatLab applications]] | ||
Revision as of 15:22, 24 February 2015
O2k-Publications: Topics
See also >>> O2k-Publications - chronological: 4695
O2k-Publications in the MiPMap: selected fields of Oxygraph-2k applications
- mt-Medicine
- Exercise physiology;nutrition;life style •• Comparative MiP;environmental MiP
- Pharmacology;toxicology
- mt-Biogenesis;mt-density •• Genetic knockout;overexpression
- Instruments;methods
Pathological states
- Aging;senescence
- Alzheimer's
- Autism
- Cancer
- Cardiovascular
- COPD
- Diabetes
- Inherited •• Infectious
- Myopathy
- Neurodegenerative
- Obesity
- Parkinson's
- Sepsis
- Other
Stress conditions
- Cancer;apoptosis;cytochrome c •• Cell death •• Hypoxia •• Ischemia-reperfusion injury and preservation •• Permeability transition •• Oxidative stress;RONS •• Temperature •• Cell death •• Mitochondrial disease;degenerative disease and defect
Mammals and models, other organisms
- Human •• Pig •• Horse •• Bovines •• Cat •• Dog •• Rabbit •• Mouse •• Rat •• Guinea pig•• Other mammals
- Chicken •• Zebrafish •• Drosophila •• Caenorhabditis elegans •• Artemia •• Saccharomyces cerevisiae
- Comparative MiP •• Plants
- Further information
Tissues, cell types and cell lines
- Heart •• Skeletal muscle •• Nervous system •• Liver •• Kidney •• Lung; gill •• Fat •• Genital •• Endothelial;epithelial;mesothelial cell •• Islet cell;pancreas;thymus •• Blood cells
- CHO •• HEK •• HeLa •• Neuroblastoma •• Fibroblast •• HUVEC •• Macrophage-derived cell lines •• Lymphocyte •• Platelet •• Stem cells •• Other cell lines
Preparations
- Intact organism •• Intact organ •• Intact cells •• Permeabilized cells •• Permeabilized tissue •• Homogenate •• Isolated mitochondria •• SMP •• Chloroplasts •• Enzyme •• Oxidase and biochemical oxidation
Regulation
- ADP •• ATP production •• Aerobic glycolysis •• Amino acid •• Calcium •• Coupling efficiency;uncoupling •• Cyt c •• Fatty acid •• Flux control •• Inhibitor •• Ion;substrate transport •• mt-Membrane potential •• O2 Redox state •• Temperature •• Threshold;excess capacity· Oxygen kinetics •• Substrate •• Uncoupler·
Enzymes
- Adenine nucleotide translocase •• Complex I •• Complex II;succinate dehydrogenase •• Complex III •• Complex IV;cytochrome c oxidase •• Complex V;ATP synthase •• Inner mt-membrane transporter •• Marker enzyme •• Supercomplex •• TCA cycle and matrix dehydrogenases •• Uncoupling protein
MiPMap combinations - examples
Examples for specific combinations are given for O2k-Publications:
- O2k-Publications: Human skeletal muscle
- O2k-Publications: Human heart
- O2k-Publications: Skeletal muscle - human vs mouse
