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A list of all pages that have property "Has abstract" with value "Alteration of mitochondrial ultrastructure has emerged as phenotypical m". Since there have been only a few results, also nearby values are displayed.

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  • Karadayian 2015 Neuroscience  + (Alcohol hangover (AH) is defined as the teAlcohol hangover (AH) is defined as the temporary state after alcohol binge-like drinking, starting when ethanol (EtOH) is absent in plasma. Previous data indicate that AH induces mitochondrial dysfunction and free radical production in mouse brain cortex. The aim of this work was to study mitochondrial function and reactive oxygen species production in mouse cerebellum at the onset of AH. Male mice received a single i.p. injection of EtOH (3.8g/kg BW) or saline solution. Mitochondrial function was evaluated 6h after injection (AH onset). At the onset of AH, malate-glutamate and succinate-supported state 4 oxygen uptake was 2.3 and 1.9-fold increased leading to a reduction in respiratory control of 55% and 48% respectively, as compared with controls. Decreases of 38% and 16% were found in Complex I-III and IV activities. Complex II-III activity was not affected by AH. Mitochondrial membrane potential and mitochondrial permeability changes were evaluated by flow cytometry. Mitochondrial membrane potential and permeability were decreased by AH in cerebellum mitochondria. Together with this, AH induced a 25% increase in superoxide anion and a 92% increase in hydrogen peroxide production in cerebellum mitochondria. Related to nitric oxide (NO) metabolism, neuronal nitric oxide synthase (nNOS) protein expression was 52% decreased by the hangover condition compared with control group. No differences were found in cerebellum NO production between control and treated mice. The present work demonstrates that the physiopathological state of AH involves mitochondrial dysfunction in mouse cerebellum showing the long-lasting effects of acute EtOH exposure in the central nervous system.OH exposure in the central nervous system.)
  • Wang 2009 Int J Clin Exp Pathol  + (Alcohol use has become far too prevalent iAlcohol use has become far too prevalent in our society. Alcohol kills 6.5 times more youth than all other illicit drugs combined. In combination with traumatic and hemorrhagic injuries, alcohol results in a much higher mortality rate. Alcohol, alone and in high dosages, also causes great damage to the body, often leading to death as well. Thus, it is of utmost importance that research is conducted to help explain the pathological mechanism of high fatalities and injuries associated with alcohol use. In order to simulate this complex situation in vitro, a rat hepatoma cell line (H-II-4-E) was exposed to various concentrations of ethanol as well as the condition of hypoxia. Hypoxia mimics the primary level of tissue damage caused by hemorrhage after impact in a car accident. In this way, we tested the hypothesis that the presence of ethanol in combination with hypoxia causes greater cellular damage compared to conditions of ethanol or hypoxia alone. Ethanol, alone and in high concentrations, was found to greatly affect cell function as shown by decreased cellular ATP levels, increased LDH release, and a downregulated expression of CYP2E1 gene. By adding the condition of hypoxia to low concentrations of ethanol, cellular damage increased dramatically as well. Decreased gene expression and protein levels of CYP2E1 correlated with increased hepatocyte injury and thus, this enzyme may significantly contribute to the severity of cellular damage. These results provide useful information for future research on the effects of ethanol in combination with hemorrhage on cells in vitro, simulating the condition of driving while intoxicated and binge drinking.ving while intoxicated and binge drinking.)
  • Wen 2023 PLoS One  + (Alcoholic myopathy is caused by chronic coAlcoholic myopathy is caused by chronic consumption of alcohol (ethanol) and is characterized by weakness and atrophy of skeletal muscle. Regular exercise is one of the important ways to prevent or alleviate skeletal muscle myopathy. However, the beneficial effects and the exact mechanisms underlying regular exercise on alcohol myopathy remain unclear. In this study, a model of alcoholic myopathy was established using zebrafish soaked in 0.5% ethanol. Additionally, these zebrafish were intervened to swim for 8 weeks at an exercise intensity of 30% of the absolute critical swimming speed (Ucrit), aiming to explore the beneficial effects and underlying mechanisms of regular exercise on alcoholic myopathy. This study found that regular exercise inhibited protein degradation, improved locomotion ability, and increased muscle fiber cross-sectional area (CSA) in ethanol-treated zebrafish. In addition, regular exercise increases the functional activity of mitochondrial respiratory chain (MRC) complexes and upregulates the expression levels of MRC complexes. Regular exercise can also improve oxidative stress and mitochondrial dynamics in zebrafish skeletal muscle induced by ethanol. Additionally, regular exercise can activate mitochondrial biogenesis and inhibit mitochondrial unfolded protein response (UPRmt). Together, our results suggest regular exercise is an effective intervention strategy to improve mitochondrial homeostasis to attenuate alcoholic myopathy.meostasis to attenuate alcoholic myopathy.)
  • ALGAEUROPE 2018 Amsterdam NL  + (AlgaEurope 2018, Amsterdam, Netherlands, 2018)
  • AlgaEurope 2020 Virtual Event  + (AlgaEurope 2020, Virtual Event, 2020, NextGen-O2k)
  • AlgaEurope 2022 Rome IT  + (AlgaEurope 2022, Rome, IT, 2022)
  • Gnaiger 2022 Abstract Bioblast-PB  + (Algal biotechnology has emerged as a high-Algal biotechnology has emerged as a high-potential industry for efficient and CO<sub>2</sub>-neutral production of biomass providing biofuels, food and feed, and a variety of carbon-based chemicals and pharmaceuticals. Algal metabolism is directly involved in the regulation of growth, cell concentration, and biosynthesis of biotechnologically-relevant phytochemicals such as vitamins, antioxidants, and immune response boosters. Photoautotrophic growth rates of algae are based on light-to-chemical energy conversion and CO<sub>2</sub> fixation, and any optimization of biomass production requires maximizing energy-use efficiency of photosynthesis and respiration, both of which vary as a function of light intensity. As such, the bioenergetic crosstalk between mitochondria and chloroplasts plays a key role in maintaining metabolic integrity and controlling intermediary metabolite production. </br></br>In the present study, we investigated how photosynthetic O<sub>2</sub> production and respiratory O<sub>2</sub> consumption was influenced as a function of light intensity, O<sub>2</sub> concentration, and culture density in the unicellular model green alga ''Chlamydomonas reinhardtii''. Cultures were grown photoautotrophically in a modified Tris-Phosphate growth medium (TRIS, N- and P-nutrient replete) at 25 °C, pH 7.0, and light intensity of 100 µmol photons·s<sup>-1</sup>·m<sup>-2</sup> (16:8 h light:dark cycle). Kinetics of light-induced O<sub>2</sub> production and dark respiration of these microalgae was measured under culture conditions and three cell concentrations, while varying O<sub>2</sub> concentrations in the Oroboros [[NextGen-O2k]] equipped with the PhotoBiology-Module [1] during stepwise increases of blue actinic light from from 10 to 350 µmol∙s<sup>-1</sup>∙m<sup>-2</sup>, followed by darkness, again at various controlled O<sub>2</sub> concentrations. Maximum net photosynthesis was inhibited by 40 % at hyperoxic O<sub>2</sub> concentrations of 550 to 650 µM, when ROS production is known to be increased [2,3]. Transient light-enhanced dark respiration [4] peaked within 30 to 60 s after light-dark transitions and was 3.5- to 4-fold higher than steady-state dark respiration independent of O<sub>2</sub> concentration in the range of 200 to 650 µM. </br></br>We conclude that high-resolution photorespiratory analysis provides a new method to investigate the oxygen kinetics of O<sub>2</sub> production and O<sub>2</sub> consumption that reveal interactions of chloroplasts and mitochondria under precisely regulated experimental light and oxygen regimes.</br><small></br># Went N, Di Marcello M, Gnaiger E (2021) Oxygen dependence of photosynthesis and light-enhanced dark respiration studied by High-Resolution PhotoRespirometry. https://doi.org/10.26124/mitofit:2021-0005</br># Komlódi T, Sobotka O, Gnaiger E (2021) Facts and artefacts on the oxygen dependence of hydrogen peroxide production using Amplex UltraRed. https://doi.org/10.26124/bec:2021-0004</br># Shimakawa G, Kohara A, Miyake C (2020) Characterization of light-enhanced respiration in cyanobacteria. https://doi.org/10.3390/ijms22010342</br></small>drogen peroxide production using Amplex UltraRed. https://doi.org/10.26124/bec:2021-0004 # Shimakawa G, Kohara A, Miyake C (2020) Characterization of light-enhanced respiration in cyanobacteria. https://doi.org/10.3390/ijms22010342 </small>)
  • Gerisch 2020 Dev Cell  + (All animals have evolved the ability to suAll animals have evolved the ability to survive nutrient deprivation, and nutrient signaling pathways are conserved modulators of health and disease. In ''C. elegans'', late-larval starvation provokes the adult reproductive diapause (ARD), a long-lived quiescent state that enables survival for months without food, yet underlying molecular mechanisms remain unknown. Here, we show that ARD is distinct from other forms of diapause, showing little requirement for canonical longevity pathways, autophagy, and fat metabolism. Instead it requires the HLH-30/TFEB transcription factor to promote the morphological and physiological remodeling involved in ARD entry, survival, and recovery, suggesting that HLH-30 is a master regulator of reproductive quiescence. HLH-30 transcriptome and genetic analyses reveal that Max-like HLH factors, AMP-kinase, mTOR, protein synthesis, and mitochondrial fusion are target processes that promote ARD longevity. ARD thus rewires metabolism to ensure long-term survival and may illuminate similar mechanisms acting in stem cell quiescence and long-term fasting.</br></br><small>Copyright © 2020 Elsevier Inc. All rights reserved.</small> 2020 Elsevier Inc. All rights reserved.</small>)
  • Hernansanz-Agustin 2019 bioRxiv  + (All metazoans depend on O<sub>2</All metazoans depend on O<sub>2</sub> delivery and consumption by the mitochondrial oxidative phosphorylation (OXPHOS) system to produce energy. A decrease in O<sub>2</sub> availability (hypoxia) leads to profound metabolic rewiring. In addition, OXPHOS uses O<sub>2</sub> to produce reactive oxygen species (ROS) that can drive cell adaptations through redox signalling, but also trigger cell damage, and both phenomena occur in hypoxia. However, the precise mechanism by which acute hypoxia triggers mitochondrial ROS production is still unknown. Ca<sup>2+</sup> is one of the best known examples of an ion acting as a second messenger, yet the role ascribed to Na<sup>+</sup> is to serve as a mere mediator of membrane potential and collaborating in ion transport. Here we show that Na<sup>+</sup> acts as a second messenger regulating OXPHOS function and ROS production by modulating fluidity of the inner mitochondrial membrane (IMM). We found that a conformational shift in mitochondrial complex I during acute hypoxia drives the acidification of the matrix and solubilization of calcium phosphate precipitates. The concomitant increase in matrix free-Ca<sup>2+</sup> activates the mitochondrial Na<sup>+</sup>/Ca<sup>2+</sup> exchanger (NCLX), which imports Na<sup>+</sup> into the matrix. Na<sup>+</sup> interacts with phospholipids reducing IMM fluidity and mobility of free ubiquinone between complex II and complex III, but not inside supercomplexes. As a consequence, superoxide is produced at complex III, generating a redox signal. Inhibition of mitochondrial Na<sup>+</sup> import through NCLX is sufficient to block this pathway, preventing adaptation to hypoxia. These results reveal that Na<sup>+</sup> import into the mitochondrial matrix controls OXPHOS function and redox signalling through an unexpected interaction with phospholipids, with profound consequences in cellular metabolismlt;/sup> import into the mitochondrial matrix controls OXPHOS function and redox signalling through an unexpected interaction with phospholipids, with profound consequences in cellular metabolism)
  • Hernansanz-Agustin 2020 Nature  + (All metazoans depend on the consumption ofAll metazoans depend on the consumption of O<sub>2</sub> by the mitochondrial oxidative phosphorylation system (OXPHOS) to produce energy. In addition, the OXPHOS uses O<sub>2</sub> to produce reactive oxygen species that can drive cell adaptations, a phenomenon that occurs in hypoxia and whose precise mechanism remains unknown. Ca<sup>2+</sup> is the best known ion that acts as a second messenger, yet the role ascribed to Na<sup>+</sup> is to serve as a mere mediator of membrane potential. Here we show that Na<sup>+</sup> acts as a second messenger that regulates OXPHOS function and the production of reactive oxygen species by modulating the fluidity of the inner mitochondrial membrane. A conformational shift in mitochondrial complex I during acute hypoxia drives acidification of the matrix and the release of free Ca<sup>2+</sup> from calcium phosphate (CaP) precipitates. The concomitant activation of the mitochondrial Na<sup>+</sup>/Ca<sup>2+</sup> exchanger promotes the import of Na<sup>+</sup> into the matrix. Na<sup>+</sup> interacts with phospholipids, reducing inner mitochondrial membrane fluidity and the mobility of free ubiquinone between complex II and complex III, but not inside supercomplexes. As a consequence, superoxide is produced at complex III. The inhibition of Na<sup>+</sup> import through the Na<sup>+</sup>/Ca<sup>2+</sup> exchanger is sufficient to block this pathway, preventing adaptation to hypoxia. These results reveal that Na<sup>+</sup> controls OXPHOS function and redox signalling through an unexpected interaction with phospholipids, with profound consequences for cellular metabolism.oxia. These results reveal that Na<sup>+</sup> controls OXPHOS function and redox signalling through an unexpected interaction with phospholipids, with profound consequences for cellular metabolism.)
  • Neves 2015 Elife  + (All organisms live within a given thermal All organisms live within a given thermal range, but little is known about the mechanisms setting the limits of this range. We uncovered cellular features exhibiting signature changes at thermal limits in ''Caenorhabditis elegans'' embryos. These included changes in embryo size and shape, which were also observed in ''Caenorhabditis briggsae'', indicating evolutionary conservation. We hypothesized that such changes could reflect restricted aerobic capacity at thermal limits. Accordingly, we uncovered that relative respiration in ''C. elegans'' embryos decreases at the thermal limits as compared to within the thermal range. Furthermore, by compromising components of the respiratory chain, we demonstrated that the reliance on aerobic metabolism is reduced at thermal limits. Moreover, embryos thus compromised exhibited signature changes in size and shape already within the thermal range. We conclude that restricted aerobic metabolism at the thermal limits contributes to setting the thermal range in a metazoan organism. the thermal range in a metazoan organism.)
  • Wilmshurst 1998 BMJ  + (All organisms require oxygen for metabolisAll organisms require oxygen for metabolism, but the oxygen in water is unavailable to mammals. Divers (and diving mammals such as whales and seals) are entirely dependent on the oxygen carried in the air in their lungs or their gas supply. Divers also have a paradoxical problem with oxygen. At higher partial pressures oxygen causes acute toxicity leading to convulsions. To understand the diver's narrow knife edge between fatal hypoxia and fatal hyperoxia we need to recall some of the physical properties of gases. At sea level atmospheric pressure is 1 bar absolute (1 standard atmosphere =101 kPa=1.013 bars). The weight of the atmosphere exerts a pressure which will support a column of water 10 m high; 10 m under water the pressure on a diver is 200 kPa. The volume of gas in an early diving bell full of air at sea level is halved at 10 m according to Boyle's law; at 20 m pressure is 300 kPa absolute and the gas is compressed into one third the volume. Dry air is composed of roughly 21 % oxygen, 78 % nitrogen, and 1 % other gases. According to Dalton's law the partial pressure of oxygen at any depth will be 21 % of the total pressure exerted by the air and the partial pressure of nitrogen will be 78 % of total pressure. Gases dissolve in the liquid with which they are in contact. Nitrogen is fat soluble and at sea level we have several litres dissolved in our bodies. If the partial pressure of nitrogen is doubled (by breathing air at 10  m depth) for long enough for equilibration to take place we will contain twice as many dissolved nitrogen molecules as at sea level. Gases dissolve in the liquid with which they are in contact. Nitrogen is fat soluble and at sea level we have several litres dissolved in our bodies. If the partial pressure of nitrogen is doubled (by breathing air at 10  m depth) for long enough for equilibration to take place we will contain twice as many dissolved nitrogen molecules as at sea level. The effect of the increased partial pressures of oxygen is more complex. Doubling our inspired partial pressure of oxygen doubles the amount of oxygen in solution but does not double the amount of oxygen in the body since a large part of our oxygen content is bound to oxygen carrying pigments. The haemoglobin in arterial blood is virtually saturated at an inspired partial pressure of oxygen (Fio2) of 21 kPa, and increasing the partial pressure of oxygen has little effect on the amount of oxygen bound to haemoglobin.the amount of oxygen bound to haemoglobin.)
  • Silvia 1976 American Psychological Association  + (All students and professors need to write,All students and professors need to write, and many struggle to finish their stalled dissertations, journal articles, book chapters, or grant proposals. Writing is hard work and can be difficult to wedge into a frenetic academic schedule.</br></br>In this practical, light-hearted, and encouraging book, Paul Silvia explains that writing productively does not require innate skills or special traits but specific tactics and actions. Drawing examples from his own field of psychology, he shows readers how to overcome motivational roadblocks and become prolific without sacrificing evenings, weekends, and vacations. After describing strategies for writing productively, the author gives detailed advice from the trenches on how to write, submit, revise, and resubmit articles, how to improve writing quality, and how to write and publish academic work.nd how to write and publish academic work.)
  • Cubizolle 2020 J Cell Mol Med  + (All-trans-retinal (atRAL) is a highly reacAll-trans-retinal (atRAL) is a highly reactive carbonyl specie, known for its reactivity on cellular phosphatidylethanolamine in photoreceptor. It is generated by photoisomerization of 11-cis-retinal chromophore linked to opsin by the Schiff's base reaction. In ABCA4-associated autosomal recessive Stargardt macular dystrophy, atRAL results in carbonyl and oxidative stress, which leads to bisretinoid A2E, accumulation in the retinal pigment epithelium (RPE). This A2E-accumulation presents as lipofuscin fluorescent pigment, and its photooxidation causes subsequent damage. Here we describe protection against a lethal dose of atRAL in both photoreceptors and RPE in primary cultures by a lipidic polyphenol derivative, an isopropyl-phloroglucinol linked to DHA, referred to as IP-DHA. Next, we addressed the cellular and molecular defence mechanisms in commonly used human ARPE-19 cells. We determined that both polyunsaturated fatty acid and isopropyl substituents bond to phloroglucinol are essential to confer the highest protection. IP-DHA responds rapidly against the toxicity of atRAL and its protective effect persists. This healthy effect of IP-DHA applies to the mitochondrial respiration. IP-DHA also rescues RPE cells subjected to the toxic effects of A2E after blue light exposure. Together, our findings suggest that the beneficial role of IP-DHA in retinal cells involves both anti-carbonyl and anti-oxidative capacities.</br></br><small>© 2020 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine.</small>ndation for Cellular and Molecular Medicine.</small>)
  • Qi 2017 Ann Allergy Asthma Immunol  + (Allergic rhinitis is the most common of thAllergic rhinitis is the most common of the atopic diseases, affecting up to 25% of the population worldwide. Grass pollen sensitization has been recognized as a major cause of allergic rhinitis. On the pathophysiologic level, allergic rhinitis is an IgE-mediated inflammation of the nasal mucosa. Grass pollen allergy, commonly called hay fever, can also cause more general symptoms, such as fatigue and unwellness as seen in flulike syndromes. This might be partly related to the activation of a systemic inflammatory pathway after the local nasal inflammatory response, but data from studies concerning the systemic effects of nasal mucosal allergen exposure are limited.</br></br>...ucosal allergen exposure are limited. ...)
  • Mutschler 2013  + (Allergien, Burn-out, Fibromyalgie, MultiplAllergien, Burn-out, Fibromyalgie, Multiple Chemikalien-Sensitivität, Fatigue-Syndrom, … die Liste der Krankheiten, die die herkömmliche Medizin – vor allem für Kassenpatienten – weder gut diagnostizieren noch wirklich erfolgreich behandeln kann, ist lang. Hinzu kommt, dass zu den bereits Genannten fast unbegrenzt weitere Erkrankungen hinzugefügt werden müssen, von denen die Lehrmedizin meint, dass sie sie behandeln kann, ihre Behandlung dem Patienten jedoch oft auch erheblich schadet: Herz-Kreislauf-Erkrankungen, Krebs, Autoimmunerkrankungen, neurodegenerative Erkrankungen, Depressionen und viele mehr. </br>Diese Patienten werden mit einer Reihe von Pharmaka versorgt, die die Symptome der Erkrankung abmildert oder bestenfalls zum Verschwinden bringt, jedoch wird dieser „Erfolg“ mit erheblichen Nebenwirkungen teuer erkauft. Meist ist die jahrzehntelange „Patienten-Karriere“ bereits klar vorgezeichnet, wenn ein Mensch in die Mühle der pharmazeutisch geprägten Medizin gerät. Es ist nur eine Frage der Zeit, wann die nächsten schwerwiegenden Symptome auftreten. Denn viele der millionenfach verschriebenen Arzneien greifen in die Physiologie einer jeden Körperzelle ein und können Stoffwechselwege ausbremsen oder gar Schäden an Organellen erzeugen – allem voran Schäden an den Mitochondrien (sekundäre Mitochondriopathien), den existenziellen Zellbestandteilen für die Energieversorgung in der kleinesten Einheit eines jeden Organs und Gewebes. Ganz zu schweigen davon, dass die ursächlich auslösenden physiologischen Bedingungen weder erkannt noch behoben werden, damit unterschwellig fortbestehen und langfristig folgerichtig weitere, neue Symptome und Erkrankungen zum Vorschein bringen. </br>Wie viel besser steht bei einem Vergleich doch die mitochondriale Medizin mit einer klar definierten Ausrichtung auf die Unterstützung und Förderung der Zellphysiologie da! Sie setzt darauf,</br>die tatsächlichen Belastungen des Körpers und seiner Zellen aufzuspüren und weitestmöglich zu beseitigen,</br>Mängel im Stoffwechsel zu orten und durch eine für den Patienten passende Ernährung und die gezielte Gabe von Makro- und Mikroelementen</br>sowie weiteren Vitalstoffen aufzuheben sowie durch geeignete Maßnahmen die Regeneration und die Teilung der Mitochondrien anzuregen und den gesamten Zellstoffwechsel zu unterstützen und zu fördern.</br>So kann mit der Zeit wieder Gesundheit entstehen und tatsächliche Heilung ist möglich.ehen und tatsächliche Heilung ist möglich.)
  • Kovalev 2018 EMBS  + (Allometric decline of mass-specific metaboAllometric decline of mass-specific metabolic rate with increasing body size in organisms is a long-known and well-documented phenomenon. The patterns observed at the organismal level indicate fundamental allometric changes in the rate of cellular metabolism and mitochondrial functioning; however, the mechanistic causes of these differences remain under debate. The aerobic metabolic rate is performed through the mitochondrial pathway of oxidative phosphorylation. Therefore, it is meaningful to predict that allometric pattern for mitochondrial functioning would reflect the pattern of aerobic metabolism. Surprisingly, there have been relatively few studies that have assessed the possible link between mitochondrial respiration and body size in invertebrates. We studied body size dependence of mitochondrial respiration of blue mussels ''Mytilus edulis'' L. Mussels were of the same age (3 years), but differed in size. In order to test functional capacities of mitochondria from mussels of different sizes respiration was determined at normal (15°C) and elevated (27°C) exposure temperatures. Mitochondria were isolated from hepatopancreas and respiration rate was measured using high-resolution respirometry method (by Oxygraph-2k, Oroboros Instruments). Substrates, inhibitors and uncoupling agents for oxidative phosphorylation (OXPHOS) and electron transport system (ETS) were added step-by-step in order to assess maximal respiration rates, respiratory control ratio, proton leak, activity and impact of all complexes of ETC. Temperature significantly accelerated state 3 (ADP-stimulated) mitochondrial respiration, maximal respiration with uncoupled ETS, and caused an increase of Respiratory Control Ratios. On the contrary, state 4 respiration (indicative of the proton leak) as well as respiration related to electron flux through complexes of ETC did not show an increase at stress temperature (27°C). Body size of mussels had a strong effect on most studied parameters. ADP-stimulated respiration, electron flux through complex IV, proton leak and uncoupled respiration showed a pronounced increase with body mass of mussels with power coefficients of 1.8, 1.2, 0.2 and 0.8, respectively. The obtained results showed that larger mussels had higher OXPHOS rates than smaller ones. Since all mussels were of the same age, larger ones obviously were characterized by rapid growth. It is possible that elevated growth abilities in some specimens compared to the others result from more efficient metabolic regulation which in turn is related to higher mitochondrial capacities.elated to higher mitochondrial capacities.)
  • Miettinen 2017 Trends Cell Biol  + (Allometric scaling of metabolic rate resulAllometric scaling of metabolic rate results in lower total mitochondrial oxygen consumption with increasing organismal size. This is considered a universal law in biology. Here, we discuss how allometric laws impose size-dependent limits to mitochondrial activity at the cellular level. This cell-size-dependent mitochondrial metabolic activity results in nonlinear scaling of metabolism in proliferating cells, which can explain size homeostasis. The allometry in mitochondrial activity can be controlled through mitochondrial fusion and fission machinery, suggesting that mitochondrial connectivity can bypass transport limitations, the presumed biophysical basis for allometry. As physical size affects cellular functionality, cell-size-dependent metabolism becomes directly relevant for development, metabolic diseases, and aging.evelopment, metabolic diseases, and aging.)
  • Nold 2019 Psychoneuroendocrinology  + (Allostasis is the process by which the bodAllostasis is the process by which the body’s physiological systems adapt to environmental changes. Chronic stress increases the allostatic load to the body, producing wear and tear that could, over time, become pathological. In this study, young adult male Wistar Kyoto rats were exposed to an unpredictable chronic mild stress (uCMS) protocol to increase allostatic load. First, physiological systems which may be affected by extended uCMS exposure were assessed. Secondly, 5 weeks of uCMS were used to investigate early adaptations in the previously selected systems. Adverse experiences during developmentally sensitive periods like adolescence are known to severely alter the individual stress vulnerability with long-lasting effects. To elucidate how early life adversity impacts stress reactivity in adulthood, an additional group with juvenile single-housing (JSH) prior to uCMS was included in the second cohort. The aim of this work was to assess the impact of chronic stress with or without adversity during adolescence on two domains known to be impacted in numerous stress-related disorders: mitochondrial energy metabolism and the immune system. Both, uCMS and adolescence stress increased kynurenine and kynurenic acid in plasma, suggesting a protective, anti-oxidant response from the kynurenine pathway. Furthermore, uCMS resulted in a down-regulation of immediate early gene expression in the prefrontal cortex and hippocampus, while only rats with the double-hit of adolescent stress and uCMS demonstrated increased mitochondrial activity in the hippocampus. These results suggest that early life adversity may impact on allostatic load by increasing energetic requirements in the brain.asing energetic requirements in the brain.)
  • Opperdoes 2024 BMC Genomics  + (Almost all extant organisms use the same, Almost all extant organisms use the same, so-called canonical, genetic code with departures from it being very rare. Even more exceptional are the instances when a eukaryote with non-canonical code can be easily cultivated and has its whole genome and transcriptome sequenced. This is the case of ''Blastocrithidia nonstop'', a trypanosomatid flagellate that reassigned all three stop codons to encode amino acids.</br></br>We ''in silico'' predicted the metabolism of ''B. nonstop'' and compared it with that of the well-studied human parasites ''Trypanosoma brucei'' and ''Leishmania major''. The mapped mitochondrial, glycosomal and cytosolic metabolism contains all typical features of these diverse and important parasites. We also provided experimental validation for some of the predicted observations, concerning, specifically presence of glycosomes, cellular respiration, and assembly of the respiratory complexes.</br></br>In an unusual comparison of metabolism between a parasitic protist with a massively altered genetic code and its close relatives that rely on a canonical code we showed that the dramatic differences on the level of nucleic acids do not seem to be reflected in the metabolisms. Moreover, although the genome of ''B. nonstop'' is extremely AT-rich, we could not find any alterations of its pyrimidine synthesis pathway when compared to other trypanosomatids. Hence, we conclude that the dramatic alteration of the genetic code of ''B. nonstop'' has no significant repercussions on the metabolism of this flagellate.ions on the metabolism of this flagellate.)
  • Zhu 2019 Aging Cell  + (Alogliptin is a commonly prescribed drug tAlogliptin is a commonly prescribed drug treating patients with type 2 diabetes. Here, we show that long-term intervention with alogliptin (0.03% w/w in diet) improves survival and health of mice on a high-fat diet. Alogliptin intervention takes beneficial effects associated with longevity, including increased insulin sensitivity, attenuated functionality decline, decreased organ pathology, preserved mitochondrial function, and reduced oxidative stress. Autophagy activation is proposed as an underlying mechanism of these beneficial effects. We conclude that alogliptin intervention could be considered as a potential strategy for extending lifespan and healthspan in obesity and overweight.</br></br><small>© 2019 The Authors. Aging Cell published by the Anatomical Society and John Wiley & Sons Ltd.</small>mical Society and John Wiley & Sons Ltd.</small>)
  • Dieter 2022 Int J Mol Sci  + (Alpha lipoic acid (ALA) is a sulphur-contaAlpha lipoic acid (ALA) is a sulphur-containing organic compound, derived from octanoic acid, and an important cofactor for mitochondrial respiratory enzymes. It has strong antioxidant properties that improve mitochondrial function. We investigated if ALA improves mitochondrial dysfunction in a cellular model of Alzheimer's disease (AD).</br></br>SH-SY5Y-APP<sub>695</sub> cells were used as a model for an early stage of AD. Vector-transfected SH-SY5Y-MOCK cells served as controls. Using these cells, we investigated mitochondrial respiration (OXPHOS), mitochondrial membrane potential (MMP), adenosine triphosphate (ATP) production, and citrate synthase activity (CS) in cells treated with ALA. Cells were treated for 24 h with different concentrations of ALA and with or without the complex I inhibitor rotenone.</br></br>Incubation with ALA showed a significant increase in ATP levels in both SH-SY5Y-APP<sub>695</sub> and SH-SY5Y-MOCK cells. MMP levels were elevated in SH-SY5Y-MOCK cells, treatment with rotenone showed a reduction in MMP, which could be partly alleviated after incubation with ALA in SH-SY5Y-MOCK cells. ALA treatment showed significant differences in respiration chain complex activities in SH-SY5Y-MOCK cells. Citrate synthase activity was unaffected. ROS levels were significantly lower in both cell lines treated with ALA.</br></br>ALA increased the activity of the different complexes of the respiratory chain, and consequently enhanced the MMP, leading to increased ATP levels indicating improved mitochondrial function. ALA only marginally protects from additional rotenone-induced mitochondrial stress.ly protects from additional rotenone-induced mitochondrial stress.)
  • Tretter 2005 Philos Trans R Soc Lond B Biol Sci  + (Alpha-ketoglutarate dehydrogenase (alpha-KAlpha-ketoglutarate dehydrogenase (alpha-KGDH) is a highly regulated enzyme, which could determine the metabolic flux through the Krebs cycle. It catalyses the conversion of alpha-ketoglutarate to succinyl-CoA and produces NADH directly providing electrons for the respiratory chain. alpha-KGDH is sensitive to reactive oxygen species (ROS) and inhibition of this enzyme could be critical in the metabolic deficiency induced by oxidative stress. Aconitase in the Krebs cycle is more vulnerable than alpha-KGDH to ROS but as long as alpha-KGDH is functional NADH generation in the Krebs cycle is maintained. NADH supply to the respiratory chain is limited only when alpha-KGDH is also inhibited by ROS. In addition being a key target, alpha-KGDH is able to generate ROS during its catalytic function, which is regulated by the NADH/NAD+ ratio. The pathological relevance of these two features of alpha-KGDH is discussed in this review, particularly in relation to neurodegeneration, as an impaired function of this enzyme has been found to be characteristic for several neurodegenerative diseases.ic for several neurodegenerative diseases.)
  • Dohlmann 2013 Abstract IOC75  + (Alteration in mitochondrial respiratory caAlteration in mitochondrial respiratory capacity has been linked to several conditions that are associated with a sedentary lifestyle, such as obesity and insulin resistance. </br>It is well known that endurance training can diminish these conditions, but some high intensity interval training (HIIT) protocols have shown similar improvements in insulin sensitivity, in spite of the reduced training volume. However it is sparse with literature regarding HIIT and the effect on mitochondrial respiratory capacity. </br>The aim of this study was to investigate the effects of a low volume HIIT protocol on mitochondrial respiratory capacity and VO2max in sedentary overweight adults. </br>8 healthy sedentary men (n=2) and women (n=6) (age 40±3 yrs, BMI 32±2, VO2max 2383 ±115 ml•min-1) were recruited for this study. They underwent 6 weeks of supervised HIIT on a cycle ergometer (18 sessions of 7x1min exercise bouts interspersed with 1min rest periods). Muscle biopsies were taken from m. vastus lateralis before and after training. Mitochondrial respiratory capacity was measured ex vivo in permeabilized muscle fibers using high resolution respirometry (Oxygraph-2k, Oroboros, Innsbruck, Austria). The respiratory protocol investigated maximal coupled state 3 respiration (complex I + II linked substrates) with the following substrates (malate, glutamate, octanoyl carnitine, succinate and ADP; GMSO3), as well as state 4o (oligomycin; LEAK). Body composition was measured by DXA, and VO2max using an incremental cycle test to exhaustion. Mitochondrial respiratory capacity increased significantly following training; GMSO3 respiration increased by 13% (57± 4 to 64±5 pmol O2•mg-1•s-1) and LEAK respiration increased by 24% (21±2 to 25±2 pmol O2 •mg-1•s-1).The present training protocol didn’t elicit a significant improvement in VO2max (4%, P = 0.37), but time to fatigue during the VO2max test was significantly increased by 18% post training (P <0.001). BMI and body composition were not changed following training.</br>Interestingly the present training protocol induced a significant improvement in mitochondrial respiratory capacity, but not in whole body VO2max, thus implying that the training stimulus was adequate to improve the respiratory capacity locally. The observed improvement in mitochondrial respiratory capacity and time to fatigue suggest that the HIIT training may induce positive metabolic effects that can attenuate the development of lifestyle diseases, independently of VO2max.</br></br>The project is funded by the EU FP7 program The project is funded by the EU FP7 program)
  • Rigoni 2016 Abstract Mito Xmas Meeting Innsbruck  + (Alteration of mitochondrial ultrastructureAlteration of mitochondrial ultrastructure has emerged as phenotypical marker of dysfunction. In particular, changes in cristae shape and number regulate the respiratory efficiency of the cell and the release of proapoptotic factors. Moreover, in the last years a growing number of studies have observed a loss of mtDNA associated to mitochondrial related disorders but whether and how mtDNA and nucleoids regulation is influenced by mitochondrial ultrastructure is unknown. To address this question we studied nucleoids distribution and mtDNA copynumber in cellular models where the mitochondrial ultrastructure has been altered. We show that nucleoids distribution vary depending on mitochondrial ultrastructure and accordingly also mtDNA copy number. Furthermore, we have identified a mitochondrial complex that decrease with nucleoids suggesting a relevant role of this complex for nucleoids and mtDNA stability. Our results suggest that nucleoids and mtDNA stability is regulated by mitochondrial ultrastructure.regulated by mitochondrial ultrastructure.)
 (Alteration of mitochondrial ultrastructure has emerged as phenotypical m)
  • Schneeberger 2015 Cell Rep  + (Alterations in ER homeostasis have been imAlterations in ER homeostasis have been implicated in the pathophysiology of obesity and type-2 diabetes (T2D). Acute ER stress induction in the hypothalamus produces glucose metabolism perturbations. However, the neurobiological basis linking hypothalamic ER stress with abnormal glucose metabolism remains unknown. Here, we report that genetic and induced models of hypothalamic ER stress are associated with alterations in systemic glucose homeostasis due to increased gluconeogenesis (GNG) independent of body weight changes. Defective alpha melanocyte-stimulating hormone (α-MSH) production underlies this metabolic phenotype, as pharmacological strategies aimed at rescuing hypothalamic α-MSH content reversed this phenotype at metabolic and molecular level. Collectively, our results posit defective α-MSH processing as a fundamental mediator of enhanced GNG in the context of hypothalamic ER stress and establish α-MSH deficiency in proopiomelanocortin (POMC) neurons as a potential contributor to the pathophysiology of T2D.contributor to the pathophysiology of T2D.)
  • Beaudoin 2014 J Physiol  + (Alterations in lipid metabolism within theAlterations in lipid metabolism within the heart may have a causal role in the establishment of diabetic cardiomyopathy, however this remains equivocal. Therefore, in the current study we determined cardiac mitochondrial bioenergetics in ZDF rats before overt type 2 diabetes and diabetic cardiomyopathy developed. In addition, we utilized resveratrol, a compound previously shown to improve prevent or reverse cardiac dysfunction in high fat-fed rodents, as a tool to potential recover dysfunctions within mitochondria. Fasting blood glucose and invasive left ventricular hemodynamic analysis confirmed the absence of type 2 diabetes and diabetic cardiomyopathy. However, fibrosis was already increased (P<0.05) ~70% in ZDF rats at this early stage in disease progression. Assessments of mitochondrial ADP and pyruvate respiratory kinetics in permeabilized fibres from the left ventricle revealed normal electron transport chain function and content. In contrast, the apparent Km to palmitoyl-CoA (P-CoA) was increased (P<0.05) ~60%, which was associated with an accumulation of intracellular triacylgycerol, diacylglycerol and ceramide species. In addition, the capacity for mitochondrial ROS emission was increased (P<0.05) ~3-fold in ZDF rats. The provision of resveratrol recovered fibrosis, P-CoA respiratory sensitivity, reactive lipid accumulation and mitochondrial reactive oxygen species emission rates. Altogether the current data supports the supposition that a chronic dysfunction within mitochondrial lipid-supported bioenergetics contributes to the development of diabetic cardiomyopathy, as this was present before overt diabetes or cardiac dysfunction. In addition, we show resveratrol supplementation prevents these changes, supporting the belief that resveratrol is a potent therapeutic approach for preventing diabetic cardiomyopathy.ic approach for preventing diabetic cardiomyopathy.)
  • Lores-Arnaiz 2016 Neurochem Res  + (Alterations in mitochondrial bioenergeticsAlterations in mitochondrial bioenergetics have been associated with brain aging. In order to evaluate the susceptibility of brain cortex synaptosomes and non-synaptic mitochondria to aging-dependent dysfunction, male Swiss mice of 3 or 17 months old were used. Mitochondrial function was evaluated by oxygen consumption, mitochondrial membrane potential and respiratory complexes activity, together with UCP-2 protein expression. Basal respiration and respiration driving proton LEAK were decreased by 26 and 33 % in synaptosomes from 17-months old mice, but spare respiratory capacity was not modified by aging. Succinate supported state 3 respiratory rate was decreased by 45 % in brain cortex non-synaptic mitochondria from 17-month-old mice, as compared with young animals, but respiratory control was not affected. Synaptosomal mitochondria would be susceptible to undergo calcium-induced depolarization in 17 months-old mice, while non-synaptic mitochondria would not be affected by calcium overload. UCP-2 was significantly up-regulated in both synaptosomal and submitochondrial membranes from 17-months old mice, compared to young animals. UCP-2 upregulation seems to be a possible mechanism by which mitochondria would be resistant to suffer oxidative damage during aging.t to suffer oxidative damage during aging.)
  • Fahlbusch 2022 Int J Mol Sci  + (Alterations in mitochondrial function are Alterations in mitochondrial function are an important control variable in the progression of metabolic dysfunction-associated fatty liver disease (MAFLD), while also noted by increased de novo lipogenesis (DNL) and hepatic insulin resistance. We hypothesized that the organization and function of a mitochondrial electron transport chain (ETC) in this pathologic condition is a consequence of shifted substrate availability. We addressed this question using a transgenic mouse model with increased hepatic insulin resistance and DNL due to constitutively active human SREBP-1c. The abundance of ETC complex subunits and components of key metabolic pathways are regulated in the liver of these animals. Further omics approaches combined with functional assays in isolated liver mitochondria and primary hepatocytes revealed that the SREBP-1c-forced fatty liver induced a substrate limitation for oxidative phosphorylation, inducing enhanced complex II activity. The observed increased expression of mitochondrial genes may have indicated a counteraction. In conclusion, a shift of available substrates directed toward activated DNL results in increased electron flows, mainly through complex II, to compensate for the increased energy demand of the cell. The reorganization of key compounds in energy metabolism observed in the SREBP-1c animal model might explain the initial increase in mitochondrial function observed in the early stages of human MAFLD.served in the early stages of human MAFLD.)
  • Huetter 2006 Exp Gerontol  + (Alterations in mitochondrial function are Alterations in mitochondrial function are believed to play a major role in aging processes in many species, including fungi and animals, and increased oxidative stress is considered a major consequence of altered mitochondrial function. In support of this theory, a lot of correlative evidence has been collected, suggesting that changes in mitochondrial DNA accumulate with age in certain tissues. Furthermore, genetic experiments from lower eukaryotic model organisms, indicate a strong correlative link between increased resistance to oxidative stress and an extended lifespan; in addition, limited experimental evidence suggests that the inhibition of mitochondrial function by selected pharmacologically active compounds can extend lifespan in certain species. However, changes in mitochondrial function may affect aging in a different way in various tissues, and a clear statement about the role of mitochondrial deterioration during physiological aging is missing for most if not all species.</br>At this point, respirometric analyses of mitochondrial function provide a tool to study age-associated changes in mitochondrial respiratory chain function and mitochondrial ATP production within living cells and isolated mitochondria. In the recent years, new instruments have been developed, which allow for an unprecedented high-resolution respirometry, which enables us to determine many parameters of mitochondrial function in routine assays using small samples of biological material. It is conceivable that this technology will become an important tool for all those, who are interested in experimentally addressing the mitochondrial theory of aging. In this article, we provide a synopsis of traditional respirometry and the advances of modern high-resolution respirometry, and discuss how future applications of this technology to recently</br>established experimental models in aging research may provide exciting new insights into the role of mitochondria in the aging process.role of mitochondria in the aging process.)
  • Harmuth 2018 Front Mol Neurosci  + (Alterations in mitochondrial morphology anAlterations in mitochondrial morphology and function have been linked to neurodegenerative diseases, including Parkinson disease, Alzheimer disease and Huntington disease. Metabolic defects, resulting from dysfunctional mitochondria, have been reported in patients and respective animal models of all those diseases. Spinocerebellar Ataxia Type 3 (SCA3), another neurodegenerative disorder, also presents with metabolic defects and loss of body weight in early disease stages although the possible role of mitochondrial dysfunction in SCA3 pathology is still to be determined. Interestingly, the SCA3 disease protein ataxin-3, which is predominantly localized in cytoplasm and nucleus, has also been associated with mitochondria in both its mutant and wildtype form. This observation provides an interesting link to a potential mitochondrial involvement of mutant ataxin-3 in SCA3 pathogenesis. Furthermore, proteolytic cleavage of ataxin-3 has been shown to produce toxic fragments and even overexpression of artificially truncated forms of ataxin-3 resulted in mitochondria deficits. Therefore, we analyzed the repercussions of expressing a naturally occurring N-terminal cleavage fragment of ataxin-3 and the influence of an endogenous expression of the S256 cleavage fragment ''in vitro'' and ''in vivo''. In our study, expression of a fragment derived from calpain cleavage induced mitochondrial fragmentation and cristae alterations leading to a significantly decreased capacity of mitochondrial respiration and contributing to an increased susceptibility to apoptosis. Furthermore, analyzing mitophagy revealed activation of autophagy in the early pathogenesis with reduced lysosomal activity. In conclusion, our findings indicate that cleavage of ataxin-3 by calpains results in fragments which interfere with mitochondrial function and mitochondrial degradation processes.n and mitochondrial degradation processes.)
  • Buck 2017 PLOS ONE  + (Alterations in mitochondrial respiration aAlterations in mitochondrial respiration are an important hallmark of Huntington's disease (HD), one of the most common monogenetic causes of neurodegeneration. The ubiquitous expression of the disease causing mutant huntingtin gene raises the prospect that mitochondrial respiratory deficits can be detected in skeletal muscle. While this tissue is readily accessible in humans, transgenic animal models offer the opportunity to cross-validate findings and allow for comparisons across organs, including the brain. The integrated respiratory chain function of the human ''vastus lateralis'' muscle was measured by high-resolution respirometry (HRR) in freshly taken fine-needle biopsies from seven pre-manifest HD expansion mutation carriers and nine controls. The respiratory parameters were unaffected. For comparison skeletal muscle isolated from HD knock-in mice (HdhQ111) as well as a broader spectrum of tissues including cortex, liver and heart muscle were examined by HRR. Significant changes of mitochondrial respiration in the HdhQ knock-in mouse model were restricted to the liver and the cortex. Mitochondrial mass as quantified by mitochondrial DNA copy number and citrate synthase activity was stable in murine HD-model tissue compared to control. mRNA levels of key enzymes were determined to characterize mitochondrial metabolic pathways in HdhQ mice. We demonstrated the feasibility to perform high-resolution respirometry measurements from small human HD muscle biopsies. Furthermore, we conclude that alterations in respiratory parameters of pre-manifest human muscle biopsies are rather limited and mirrored by a similar absence of marked alterations in HdhQ skeletal muscle. In contrast, the HdhQ111 murine cortex and liver did show respiratory alterations highlighting the tissue specific nature of mutant huntingtin effects on respiration. mutant huntingtin effects on respiration.)
  • Ekbal 2013 Chest  + (Alterations in oxygen transport and use arAlterations in oxygen transport and use are integral to the development of multiple organ failure; therefore, the ultimate goal of resuscitation is to restore effective tissue oxygenation and cellular metabolism. Hemodynamic monitoring is the cornerstone of management to promptly identify and appropriately manage (impending) organ dysfunction. Prospective randomized trials have confirmed outcome benefit when preemptive or early treatment is directed toward maintaining or restoring adequate tissue perfusion. However, treatment end points remain controversial, in large part because of current difficulties in determining what constitutes "optimal." Information gained from global whole-body monitoring may not detect regional organ perfusion abnormalities until they are well advanced. Conversely, the ideal "canary" organ that is readily accessible for monitoring, yet offers an early and sensitive indicator of tissue "unwellness," remains to be firmly identified. This review describes techniques available for real-time monitoring of tissue perfusion and metabolism and highlights novel developments that may complement or even supersede current tools.omplement or even supersede current tools.)
  • Schaefer 2017 Neurophotonics  + (Alterations of cellular bioenergetics are Alterations of cellular bioenergetics are a common feature in most neurodegenerative disorders. However, there is a selective vulnerability of different brain regions, cell types, and even mitochondrial populations to these metabolic disturbances. Thus, the aim of our study was to establish and validate an ''in vivo'' metabolic imaging technique to screen for mitochondrial function on the subcellular level. Based on nicotinamide adenine dinucleotide (phosphate) fluorescence lifetime imaging microscopy [NAD(P)H FLIM], we performed a quantitative correlation to high-resolution respirometry. Thereby, we revealed mitochondrial matrix pH as a decisive factor in imaging NAD(P)H redox state. By combining both parameters, we illustrate a quantitative, high-resolution assessment of mitochondrial function in metabolically modified cells as well as in an amyloid precursor protein-overexpressing model of Alzheimer's disease. Our metabolic imaging technique provides the basis for dissecting mitochondrial deficits not only in a range of neurodegenerative diseases, shedding light onto bioenergetic failures of cells remaining in their metabolic microenvironment.ining in their metabolic microenvironment.)
  • Koliaki 2013 Mol Cell Endocrinol  + (Alterations of hepatic mitochondrial functAlterations of hepatic mitochondrial function have been observed in states of insulin resistance and non-alcoholic fatty liver disease (NAFLD). Patients with overt type 2 diabetes mellitus (T2DM) can exhibit reduction in hepatic adenosine triphosphate (ATP) synthesis and impaired repletion of their hepatic ATP stores upon ATP depletion by fructose. Obesity and NAFLD may also associate with impaired ATP recovery after ATP-depleting challenges and augmented oxidative stress in the liver. On the other hand, patients with obesity or NAFLD can present with upregulated hepatic anaplerotic and oxidative fluxes, including β-oxidation and tricarboxylic cycle activity. The present review focuses on the methods and data on hepatic energy metabolism in various states of human insulin resistance. We propose that the liver can adapt to increased lipid exposition by greater lipid storing and oxidative capacity, resulting in increased oxidative stress, which in turn could deteriorate hepatic mitochondrial function in chronic insulin resistance and NAFLD.n in chronic insulin resistance and NAFLD.)
  • Fazzini 2016 Abstract Mito Xmas Meeting Innsbruck  + (Alterations of mitochondrial DNA (mtDNA) cAlterations of mitochondrial DNA (mtDNA) copy number appear to be associated with several pathologies including encephalopathies and neuropathies as well as the process of aging [1-2].</br></br>The aim of this study was to set up a reliable quantitative PCR based assay for mitochondrial DNA copy number determination meeting quality requirements for mtDNA specificity.</br></br>We established a duplex quantitative PCR assay that allows for targeting a single copy nuclear gene (ß2-microglobulin) and the mtDNA (t-RNA Leu) simultaneously. </br></br>The use of a plasmid containing both targets in a 1:1 ratio was used to normalize against differences in emission intensities of the fluorescent dyes VIC and FAM. </br></br>QPCR on the serial dilution of the calibrator plasmid revealed that the FAM dye emission signal exceeded the VIC signal, resulting in a ΔCT value of up to 1.2 cycles corresponding to more than a double amount of molecules. Using the plasmid calibrator with internal positive controls reduced the intra-assay variability from 21% (uncorrected) to 7% (plasmid corrected). We evaluated the applicability of the method by using DNA samples that were isolated with different methods and revealed significantly different numbers of mtDNA copies (copy number ratio: salting out/magnetic beads = 1.65).</br></br>We developed a sensitive and robust assay for mitochondrial copy number detection relative to nuclear DNA. The use of the dual insert calibrator plasmid allows for correction against unequal emission intensities of the differently fluorescence labelled targets. Furthermore, we discovered that the diverse extraction methods selectively isolate different DNA molecules within a sample.e different DNA molecules within a sample.)
  • Pak 2013 Am J Respir Cell Mol Biol  + (Alterations of mitochondrial membrane poteAlterations of mitochondrial membrane potential (MMP), reactive oxygen species (ROS), and mitochondrial respiration are possible triggers of pulmonary vascular remodeling in pulmonary hypertension (PH). We investigated the role of MMP in PH and hypothesized that deletion of the mitochondrial uncoupling protein 2 (UCP2) increases MMP, thus promoting pulmonary vascular remodeling and PH. MMP was measured by JC-1 in isolated pulmonary arterial smooth muscle cells (PASMCs) of patients with PH and animals with PH induced by exposure to monocrotaline (MCT) or chronic hypoxia. PH was quantified ''in vivo'' in UCP2-deficient (UCP2(-/-)) mice by hemodynamics, morphometry, and echocardiography. ROS were measured by electron spin resonance spectroscopy and proliferation by thymidine incorporation. Mitochondrial respiration was investigated by high-resolution respirometry. MMP was increased in PASMCs of patients and in animal models of PH. UCP2(-/-) mice exhibited pulmonary vascular remodeling and mild PH compared with wild-type (WT) mice. PASMCs of UCP2(-/-) mice showed increased proliferation, MMP, and ROS release. Increased proliferation of UCP2(-/-) PASMCs could be attenuated by ROS inhibitors and inhibited by carbonyl cyanide 4-(trifluoromethoxy)phenylhydrazone, which decreased MMP to the level of WT mice. Mitochondrial respiration was altered in PASMCs from MCT rats and PASMCs exposed to hypoxia but not in isolated pulmonary mitochondria of UCP2(-/-) mice or PASMCs after treatment with small interfering RNA for UCP2. Our data suggest that increased MMP causes vascular remodeling in UCP2(-/-) mice partially via increased ROS. In chronic hypoxia and MCT-induced PH, additional pathomechanisms such as decreased respiration may play a role. as decreased respiration may play a role.)
  • Goldberg 2019 Biochem J  + (Alterations to branched-chain keto acid (BAlterations to branched-chain keto acid (BCKA) oxidation have been implicated in a wide variety of human diseases, ranging from diabetes to cancer. Although global shifts in BCKA metabolism-evident by gene transcription, metabolite profiling, and ''in vivo'' flux analyses have been documented across various pathological conditions, the underlying biochemical mechanism(s) within the mitochondrion remain largely unknown. ''In vitro'' experiments using isolated mitochondria represent a powerful biochemical tool for elucidating the role of the mitochondrion in driving disease. Such analyses have routinely been utilized across disciplines to shed valuable insight into mitochondrial-linked pathologies. That said, few studies have attempted to model ''in vitro'' BCKA oxidation in isolated organelles. The impetus for the present study stemmed from the knowledge that complete oxidation of each of the three BCKAs involves a reaction dependent upon bicarbonate and ATP, both of which are not typically included in respiration experiments. Based on this, it was hypothesized that the inclusion of exogenous bicarbonate and stimulation of respiration using physiological shifts in ATP-free energy, rather than excess ADP, would allow for maximal BCKA-supported respiratory flux in isolated mitochondria. This hypothesis was confirmed in mitochondria from several mouse tissues, including heart, liver and skeletal muscle. What follows is a thorough characterization and validation of a novel biochemical tool for investigating BCKA metabolism in isolated mitochondria.</br></br><small>© 2019 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.</small>ed on behalf of the Biochemical Society.</small>)
  • Goldberg 2021 Biochem J  + (Alterations to branched-chain keto acid (BAlterations to branched-chain keto acid (BCKA) oxidation have been implicated in a wide variety of human diseases, ranging from diabetes to cancer. Although global shifts in BCKA metabolism-evident by gene transcription, metabolite profiling, and ''in vivo'' flux analyses have been documented across various pathological conditions, the underlying biochemical mechanism(s) within the mitochondrion remain largely unknown. ''In vitro'' experiments using isolated mitochondria represent a powerful biochemical tool for elucidating the role of the mitochondrion in driving disease. Such analyses have routinely been utilized across disciplines to shed valuable insight into mitochondrial-linked pathologies. That said, few studies have attempted to model ''in vitro'' BCKA oxidation in isolated organelles. The impetus for the present study stemmed from the knowledge that complete oxidation of each of the three BCKAs involves a reaction dependent upon bicarbonate and ATP, both of which are not typically included in respiration experiments. Based on this, it was hypothesized that the inclusion of exogenous bicarbonate and stimulation of respiration using physiological shifts in ATP-free energy, rather than excess ADP, would allow for maximal BCKA-supported respiratory flux in isolated mitochondria. This hypothesis was confirmed in mitochondria from several mouse tissues, including heart, liver and skeletal muscle. What follows is a thorough characterization and validation of a novel biochemical tool for investigating BCKA metabolism in isolated mitochondria. BCKA metabolism in isolated mitochondria.)
  • Fisar 2019 Clin Biochem  + (Altered amyloid metabolism and mitochondriAltered amyloid metabolism and mitochondrial dysfunction play key roles in the development of Alzheimer's disease (AD). We asked whether an association exists between disturbed platelet mitochondrial respiration and the plasma concentrations of Aβ<sub>40</sub> and Aβ<sub>42</sub> in patients with AD.</br></br>Plasma Aβ<sub>40</sub> and Aβ<sub>42</sub> concentrations and mitochondrial respiration in intact and permeabilized platelets were measured in 50 patients with AD, 15 patients with vascular dementia and 25 control subjects. A pilot longitudinal study was performed to monitor the progression of AD in a subgroup 11 patients with AD.</br></br>The mean Aβ<sub>40</sub>, Aβ<sub>42</sub> and Aβ<sub>42</sub>/Aβ<sub>40</sub> levels were not significantly altered in patients with AD compared with controls. The mitochondrial respiratory rate in intact platelets was significantly reduced in patients with AD compared to controls, particularly the basal respiratory rate, maximum respiratory capacity, and respiratory reserve; however, the flux control ratio for basal respiration was increased. A correlation between the plasma Aβ<sub>42</sub> concentration and mitochondrial respiration in both intact and permeabilized platelets differs in controls and patients with AD.</br></br>Based on our data, (1) mitochondrial respiration in intact platelets, but not the Aβ level itself, may be included in a panel of biomarkers for AD; (2) dysfunctional mitochondrial respiration in platelets is not explained by changes in plasma Aβ concentrations; and (3) the association between mitochondrial respiration in platelets and plasma Aβ levels differs in patients with AD and controls. The results supported the hypothesis that mitochondrial dysfunction is the primary factor contributing to the development of AD.</br></br><small>Copyright © 2019. Published by Elsevier Inc.</small>at mitochondrial dysfunction is the primary factor contributing to the development of AD. <small>Copyright © 2019. Published by Elsevier Inc.</small>)
  • Chowdhury 2018 Oxid Med Cell Longev  + (Altered cellular metabolism is considered Altered cellular metabolism is considered a hallmark of cancer and is fast becoming an avenue for therapeutic intervention. Mitochondria have recently been viewed as an important cellular compartment that fuels the metabolic demands of cancer cells. Mitochondria are the major source of ATP and metabolites necessary to fulfill the bioenergetics and biosynthetic demands of cancer cells. Furthermore, mitochondria are central to cell death and the main source for generation of reactive oxygen species (ROS). Overall, the growing evidence now suggests that mitochondrial bioenergetics, biogenesis, ROS production, and adaptation to intrinsic oxidative stress are elevated in chronic lymphocytic leukemia (CLL). Hence, recent studies have shown that mitochondrial metabolism could be targeted for cancer therapy. This review focuses the recent advancements in targeting mitochondrial metabolism for the treatment of CLL.drial metabolism for the treatment of CLL.)
  • Schoepf 2016 FEBS J  + (Altered mitochondrial metabolism plays a pAltered mitochondrial metabolism plays a pivotal role in the development and progression of various diseases, including cancer. Cell lines are frequently used as models to study mitochondrial (dys)function but little is known about their mitochondrial respiration and metabolic properties in comparison to the primary tissue of origin. We have developed a method for assessment of oxidative phosphorylation in prostate tissue samples of only 2 mg wet weight using high-resolution respirometry. Reliable protocols were established to investigate the respiratory activity of different segments of the mitochondrial electron transfer-pathway in mechanically permeabilized tissue biopsies. Additionally, the widely used immortalized prostate epithelial and fibroblast cell lines RWPE1 and NAF, representing the major cell types in prostate tissue, were analyzed and compared to the tissue of origin. Our results show that mechanical treatment without chemical permeabilization agents or sample processing constitutes a reliable preparation method for OXPHOS analysis in small amounts of prostatic tissue typically obtained by prostate biopsy. The cell lines represented the bioenergetic properties of fresh tissue to a limited extent only. Particularly, tissue showed a higher oxidative capacity with succinate and glutamate, whereas pyruvate was a substrate supporting significantly higher respiratory activities in cell lines. Several fold higher zinc levels measured in tissue compared to cells confirmed the role of aconitase for prostate specific metabolism in agreement with observed respiratory properties. In conclusion, combining the flexibility of cell culture models and tissue samples for respirometric analysis are powerful tools for investigation of mitochondrial function and tissue specific metabolism.</br><br><br>n and tissue specific metabolism. <br><br>)
  • Kupats 2020 Oxid Med Cell Longev  + (Altered neuronal Ca<sup>2+</sup&gAltered neuronal Ca<sup>2+</sup> homeostasis and mitochondrial dysfunction play a central role in the pathogenesis of traumatic brain injury (TBI). R-Phenibut ((3R)-phenyl-4-aminobutyric acid) is an antagonist of the α2δ subunit of voltage-dependent calcium channels (VDCC) and an agonist of gamma-aminobutyric acid B (GABA-B) receptors. The aim of this study was to evaluate the potential therapeutic effects of R-phenibut following the lateral fluid percussion injury (latFPI) model of TBI in mice and the impact of R- and S-phenibut on mitochondrial functionality ''in vitro''. By determining the bioavailability of R-phenibut in the mouse brain tissue and plasma, we found that R-phenibut (50 mg/kg) reached the brain tissue 15 min after intraperitoneal (i.p.) and peroral (p.o.) injections. The maximal concentration of R-phenibut in the brain tissues was 0.6 μg/g and 0.2 μg/g tissue after i.p. and p.o. administration, respectively. Male Swiss-Webster mice received i.p. injections of R-phenibut at doses of 10 or 50 mg/kg 2 h after TBI and then once daily for 7 days. R-Phenibut treatment at the dose of 50 mg/kg significantly ameliorated functional deficits after TBI on postinjury days 1, 4, and 7. Seven days after TBI, the number of Nissl-stained dark neurons (N-DNs) and interleukin-1beta (IL-1β) expression in the cerebral neocortex in the area of cortical impact were reduced. Moreover, the addition of R- and S-phenibut at a concentration of 0.5 μg/ml inhibited calcium-induced mitochondrial swelling in the brain homogenate and prevented anoxia-reoxygenation-induced increases in mitochondrial H2O2 production and the H<sub>2</sub>O<sub>2</sub>/O ratio. Taken together, these results suggest that R-phenibut could serve as a neuroprotective agent and promising drug candidate for treating TBI.erve as a neuroprotective agent and promising drug candidate for treating TBI.)
  • Porter 2015 Burns  + (Altered skeletal muscle mitochondrial funcAltered skeletal muscle mitochondrial function contributes to the pathophysiological stress response to burns. However, the acute and chronic impact of burn trauma on skeletal muscle bioenergetics remains poorly understood. Here, we determined the temporal relationship between burn trauma and mitochondrial function in murine skeletal muscle local to and distal from burn wounds. Male BALB/c mice (8-10 weeks old) were burned by submersion of the dorsum in water (∼95°C) to create a full thickness burn on ∼30% of the body. Skeletal muscle was harvested spinotrapezius underneath burn wounds (local) and the quadriceps (distal) of sham and burn treated mice at 3h, 24h, 4d and 10d post-injury. Mitochondrial respiration was determined in permeabilized myofiber bundles by high-resolution respirometry. Caspase 9 and caspase 3 protein concentration were determined by western blot. In muscle local to burn wounds, respiration coupled to ATP production was significantly diminished at 3h and 24h post-injury (''P''<0.001), as was mitochondrial coupling control (''P''<0.001). There was a 5- (''P''<0.05) and 8-fold (''P''<0.001) increase in respiration in response to cytochrome at 3h and 24h post burn, respectively, indicating damage to the outer mitochondrial membranes. Moreover, we also observed greater active caspase 9 and caspase 3 in muscle local to burn wounds, indicating the induction of apoptosis. Distal muscle mitochondrial function was unaltered by burn trauma until 10d post burn, where both respiratory capacity (''P''<0.05) and coupling control (''P''<0.05) were significantly lower than sham. These data highlight a differential response in muscle mitochondrial function to burn trauma, where the timing, degree and mode of dysfunction are dependent on whether the muscle is local or distal to the burn wound. on whether the muscle is local or distal to the burn wound.)
  • Krischek 2016 Mol Reprod Dev  + (Altering incubation temperature during embAltering incubation temperature during embryogenesis has an impact on chicken embryo growth, but the underlying molecular mechanisms are not understood; the present study was performed to address these changes. Broiler eggs were incubated at low (36.8°C), control (37.8°C), and high (38.8°C) temperatures between Embryonic Day (ED) 7 and 10 or ED 10 and 13, which cover critical periods of embryonic myogenesis. The embryos were then dissected immediately after treatment on ED 10 or 13 to assess body, liver, and heart weights as well as to analyze breast and leg muscle fibers for their mitochondrial respiratory activity (MRA). Breast muscle samples were additionally used to evaluate the activity of enzymes involved in energy metabolism and cell-cycle progression. ED-10 embryos incubated at 38.8°C showed elevated weights (body, liver, and heart), MRA, and activities of lactate dehydrogenase and cytochrome oxidase compared to the ED-10 embryos incubated at 36.8°C. Similarly, the ED-13 embryos incubated at 38.8°C showed elevated body weight, MRA, and activities of glycogen phosphorylase, phosphofructokinase, and cytochrome oxidase compared to their 36.8°C counterparts. Embryos incubated at the normal temperature (37.8°C), however, showed variable differences from those incubated at 38.8°C versus 36.8°C. Cell-cycle enzyme activities were not impacted by the different temperature treatments. Thus, an increase or decrease in the incubation temperature during embryonic broiler myogenesis results in altered embryo activity, muscle energy metabolism, and activity-dependent muscle growth.ism, and activity-dependent muscle growth.)
  • Oparka 2014 Abstract MiP2014  + (Alternations of pivotal mitochondrial funcAlternations of pivotal mitochondrial function – oxidative phosphorylation as well as abnormal cellular ROS production - can potentially be responsible for pathogenesis of cancer. In the last years, implications of p66Shc adaptor protein in the cellular response to oxidative stress have been discovered. Involvement of this protein in cell death is related to oxidative stress. Phosphorylation of p66Shc at Ser36 can be activated by extracellular or intracellular reactive oxygen species (ROS), and an initiated cascade of events is finally involved in the amplification of mitochondrial ROS production. </br></br>The available literature does not contain a lot of data concerning the role of p66shc and its Ser36 phosphorylation in tumorigenesis and cancer growth. Therefore, we studied the relationship between ROS production, antioxidant defense systems and the level of p66Shc as well as p66Shc phosphorylation in murine cancer cell lines, derived from ectoderm (B16-F10, B78, MmB16, EMT6, 4T1), mesoderm (Renca) and endoderm (CT26.WT, Hepa1-6, LLC, Panc02).</br></br>The cancer cells exhibited various levels of p66Shc and its Ser36 phosphorylation, which simultaneously is negatively correlated with the level of superoxide dismutase 2 in some of the investigated cancer cell lines. </br></br>ROS can mediate opposing cellular functions like cell proliferation and apoptosis. In turn, p66Shc Ser36 phosphorylation pathway is involved in regulation of mitochondrial metabolism and is responsible for elevated intracellular ROS levels. Moreover, p66Shc seems to play an important role in cancer metastasis and cancer cell adhesion. This emphasizes the importance of understanding the mechanisms and sites of ROS formation in cancer cells, the role of p66Shc in this process and the effect on tumor physiology.</br></br>Supported by Statutory Founding from Nencki Institute of Experimental Biology and Polish Ministry of Science and Higher Education grant W100/HFSC/2011.and Higher Education grant W100/HFSC/2011.)
  • Polajnar 2014 PLOS ONE  + (Alternative functions, apart from cathepsiAlternative functions, apart from cathepsins inhibition, are being discovered for stefin B. Here, we investigate its role in vesicular trafficking and autophagy. Astrocytes isolated from stefin B knock-out (KO) mice exhibited an increased level of protein aggregates scattered throughout the cytoplasm. Addition of stefin B monomers or small oligomers to the cell medium reverted this phenotype, as imaged by confocal microscopy. To monitor the identity of proteins embedded within aggregates in wild type (wt) and KO cells, the insoluble cell lysate fractions were isolated and analyzed by mass spectrometry. Chaperones, tubulins, dyneins, and proteosomal components were detected in the insoluble fraction of wt cells but not in KO aggregates. In contrast, the insoluble fraction of KO cells exhibited increased levels of apolipoprotein E, fibronectin, clusterin, major prion protein, and serpins H1 and I2 and some proteins of lysosomal origin, such as cathepsin D and CD63, relative to wt astrocytes. Analysis of autophagy activity demonstrated that this pathway was less functional in KO astrocytes. In addition, synthetic dosage lethality (SDL) gene interactions analysis in ''Saccharomyces cerevisiae'' expressing human stefin B suggests a role in transport of vesicles and vacuoles These activities would contribute, directly or indirectly to completion of autophagy in wt astrocytes and would account for the accumulation of protein aggregates in KO cells, since autophagy is a key pathway for the clearance of intracellular protein aggregates.rance of intracellular protein aggregates.)
  • Rajendran 2019 EMBO Mol Med  + (Alternative oxidase (AOX) is a non-mammaliAlternative oxidase (AOX) is a non-mammalian enzyme that can bypass blockade of the complex III-IV segment of the respiratory chain (RC). We crossed a Ciona intestinalis AOX transgene into RC complex III (cIII)-deficient Bcs1l<sup>p.S78G</sup> knock-in mice, displaying multiple visceral manifestations and premature death. The homozygotes expressing AOX were viable, and their median survival was extended from 210 to 590 days due to permanent prevention of lethal cardiomyopathy. AOX also prevented renal tubular atrophy and cerebral astrogliosis, but not liver disease, growth restriction, or lipodystrophy, suggesting distinct tissue-specific pathogenetic mechanisms. Assessment of reactive oxygen species (ROS) production and damage suggested that ROS were not instrumental in the rescue. Cardiac mitochondrial ultrastructure, mitochondrial respiration, and pathological transcriptome and metabolome alterations were essentially normalized by AOX, showing that the restored electron flow upstream of cIII was sufficient to prevent cardiac energetic crisis and detrimental decompensation. These findings demonstrate the value of AOX, both as a mechanistic tool and a potential therapeutic strategy, for cIII deficiencies.</br></br><small>© 2018 The Authors. Published under the terms of the CC BY 4.0 license.</small> Published under the terms of the CC BY 4.0 license.</small>)
  • Robertson 2016 J Bioenerg Biomembr  + (Alternative oxidase (AOX) is a terminal oxAlternative oxidase (AOX) is a terminal oxidase within the inner mitochondrial membrane (IMM) present in many organisms where it functions in the electron transport system (ET-pathway). AOX directly accepts electrons from ubiquinol and is therefore capable of bypassing ET-pathway Complexes III and IV. The human genome does not contain a gene coding for AOX, so AOX expression has been suggested as a gene therapy for a range of human mitochondrial diseases caused by genetic mutations that render Complex III and/or IV dysfunctional. An effective means of screening mutations amenable to AOX treatment remains to be devised. We have generated such a tool by heterologously expressing AOX from the Pacific oyster (''Crassostrea gigas'') in the yeast ''Saccharomyces cerevisiae'' under the control of a galactose promoter. Our results show that this animal AOX is monomeric and is correctly targeted to yeast mitochondria. Moreover, when expressed in yeast, Pacific oyster AOX is a functional quinol oxidase, conferring cyanide-resistant growth and myxothiazol-resistant oxygen consumption to yeast cells and isolated mitochondria. This system represents a high-throughput screening tool for determining which Complex III and IV genetic mutations in yeast will be amenable to AOX gene therapy. As many human genes are orthologous to those found in yeast, our invention represents an efficient and cost-effective way to evaluate viable research avenues. In addition, this system provides the opportunity to learn more about the localization, structure, and regulation of AOXs from animals that are not easily reared or manipulated in the lab.t easily reared or manipulated in the lab.)
  • McDonald 2011 Abstract IOC65  + (Alternative oxidase (AOX) is a ubiquinol tAlternative oxidase (AOX) is a ubiquinol terminal oxidase present in the respiratory electron transport chains of a wide variety of organisms [1]. AOX by-passes 2 of the 3 proton pumping complexes in the respiratory chain and therefore makes respiration less efficient in terms of the amount of ATP generated per oxygen consumed. Our previous work using bioinformatics has revealed the presence of AOX genes in eukaryotic organisms such as plants, animals, fungi, algae, and protists, as well as in prokaryotes in several species of eubacteria [2]. Recent work using reverse transcriptase polymerase chain reaction (RT-PCR) experiments has demonstrated that these genes are transcribed in many organisms [3]. Our focus is now shifting to exploring the respiratory capacity of AOX proteins in these different systems and in identifying how the activity of AOX proteins is regulated at the post-translational level.regulated at the post-translational level.)
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