Difference between revisions of "O2k-Publications: Topics"
From Bioblast
Line 37: | Line 37: | ||
# [[O2k-Publications: Other cell lines|Other cell lines]] | # [[O2k-Publications: Other cell lines|Other cell lines]] | ||
Β | == Humans and biomedical model organisms == | ||
== Humans and model organisms == | |||
# [[O2k-Publications: Human|Human]] | # [[O2k-Publications: Human|Human]] | ||
# [[O2k-Publications: Pig|Pig]] | # [[O2k-Publications: Pig|Pig]] | ||
Line 51: | Line 50: | ||
# [[O2k-Publications: Zebrafish|Zebrafish]] | # [[O2k-Publications: Zebrafish|Zebrafish]] | ||
# [[O2k-Publications: Drosophila|Drosophila]] | # [[O2k-Publications: Drosophila|Drosophila]] | ||
# [[O2k-Publications: Caenorhabditis elegans|Caenorhabditis elegans]] | # [[O2k-Publications: Caenorhabditis elegans|Caenorhabditis elegans]] | ||
# [[O2k-Publications: Saccharomyces cerevisiae|Saccharomyces cerevisiae]] | # [[O2k-Publications: Saccharomyces cerevisiae|Saccharomyces cerevisiae]] | ||
== Ecophysiological model organisms == | |||
''Work in progress'' | |||
# [[O2k-Publications: Artemia|Artemia]] | |||
== Taxonomic groups == | == Taxonomic groups == | ||
Β ''Work in progress'' | Β ''Work in progress'' | ||
# [[O2k-Publications: Mammals|Mammals]]: including only mammals that are '''not listed under human or model organisms'''. | # [[O2k-Publications: Mammals|Mammals]]: including only mammals that are '''not listed under human or model organisms'''. | ||
# [[O2k-Publications: Birds|Birds]] - see also [[O2k-Publications: Chicken|Chicken]] ( | # [[O2k-Publications: Birds|Birds]] - see also [[O2k-Publications: Chicken|Chicken]] (included) | ||
# [[O2k-Publications: Reptiles|Reptiles]] - turtles, lizards, snakes, crocodiles, alligators | # [[O2k-Publications: Reptiles|Reptiles]] - turtles, lizards, snakes, crocodiles, alligators | ||
# [[O2k-Publications: Amphibians|Amphibians]] - frogs, toads, salamanders | # [[O2k-Publications: Amphibians|Amphibians]] - frogs, toads, salamanders | ||
# [[O2k-Publications: Fishes|Fishes]] - bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); see also [[O2k-Publications: Zebrafish|Zebrafish]] (included) | # [[O2k-Publications: Fishes|Fishes]] - bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); see also [[O2k-Publications: Zebrafish|Zebrafish]] (included) | ||
# [[O2k-Publications: Hexapods|Hexapods]] - insects, springtails; see also [[O2k-Publications: Drosophila|Drosophila]] (included) | |||
# [[O2k-Publications: Crustaceans|Crustaceans]] - crabs, shrimp, barnacles, etc.; see also [[O2k-Publications: Artemia|Artemia]] (included) | |||
# [[O2k-Publications: Hexapods|Hexapods]] - insects, springtails; see also [[O2k-Publications: Drosophila|Drosophila]] ( | |||
# [[O2k-Publications: Crustaceans|Crustaceans]] - crabs, shrimp, barnacles, etc.; see also [[O2k-Publications: Artemia|Artemia]] ( | |||
# [[O2k-Publications: Annelids|Annelids]] - polychaetes, e.g. lugworm ''Arenicola marina'', oligochaetes, leeches Β | # [[O2k-Publications: Annelids|Annelids]] - polychaetes, e.g. lugworm ''Arenicola marina'', oligochaetes, leeches Β | ||
# [[O2k-Publications: Molluscs|Molluscs]] - gastropods, cephalopods, bivalves | # [[O2k-Publications: Molluscs|Molluscs]] - gastropods, cephalopods, bivalves | ||
# [[O2k-Publications: Nematodes|Nematodes]] - see also [[O2k-Publications: Caenorhabditis elegans|Caenorhabditis elegans]] ( | # [[O2k-Publications: Nematodes|Nematodes]] - see also [[O2k-Publications: Caenorhabditis elegans|Caenorhabditis elegans]] (included) Β | ||
# [[O2k-Publications: Other invertebrates|Other invertebrates]] - urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ... | |||
# [[O2k-Publications: Fungi|Fungi]] - yeast, molds, mushrooms, etc. see also [[O2k-Publications: Saccharomyces cerevisiae|Saccharomyces cerevisiae]] (included) | |||
# [[O2k-Publications: Other invertebrates|Other invertebrates]] - gastrotrichs | |||
# [[O2k-Publications: Fungi|Fungi]] - yeast, molds, mushrooms, etc. see also [[O2k-Publications: Saccharomyces cerevisiae|Saccharomyces cerevisiae]] ( | |||
# [[O2k-Publications: Plants|Plants]] | # [[O2k-Publications: Plants|Plants]] | ||
# [[O2k-Publications: Protists|Protists]] - amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc. | # [[O2k-Publications: Protists|Protists]] - amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc. |
Revision as of 16:43, 21 June 2013
O2k-Publications: Specific topics
Mitochondrial preparations and intact cells
- Isolated Mitochondria
- Homogenate
- Permeabilized muscle fibres and tissue preparations
- Permeabilized cells
- Intact cell; Cultured; Primary
Tissues and cell types
- Nervous system
- Heart
- Skeletal muscle
- Liver
- Kidney
- Lung, Gill
- Fat
- Endothelial; Epithelial; Mesothelial Cell
- Islet Cell; Pancreas; Thymus
- Blood Cell; Suspension Culture
Model cell lines
- CHO
- HEK
- HeLa
- Neuroblastoma
- Fibroblast
- HUVEC
- Macrophage-derived cell lines
- Stem cells
- Other cell lines
Humans and biomedical model organisms
- Human
- Pig
- Horse
- Cat
- Dog
- Rabbit
- Mouse
- Rat
- Guinea pig
- Chicken
- Zebrafish
- Drosophila
- Caenorhabditis elegans
- Saccharomyces cerevisiae
Ecophysiological model organisms
Work in progress
Taxonomic groups
Work in progress
- Mammals: including only mammals that are not listed under human or model organisms.
- Birds - see also Chicken (included)
- Reptiles - turtles, lizards, snakes, crocodiles, alligators
- Amphibians - frogs, toads, salamanders
- Fishes - bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); see also Zebrafish (included)
- Hexapods - insects, springtails; see also Drosophila (included)
- Crustaceans - crabs, shrimp, barnacles, etc.; see also Artemia (included)
- Annelids - polychaetes, e.g. lugworm Arenicola marina, oligochaetes, leeches
- Molluscs - gastropods, cephalopods, bivalves
- Nematodes - see also Caenorhabditis elegans (included)
- Other invertebrates - urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ...
- Fungi - yeast, molds, mushrooms, etc. see also Saccharomyces cerevisiae (included)
- Plants
- Protists - amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc.
- Eubacteria - true bacteria, cyanobacteria, spirochetes
- Archaea - archaebacteria
Coupling and membrane potential
Specific applications
Medical and pharmacological applications
- Hypoxia
- Ischemia-reperfusion injury and preservation
- RONS Oxidative stress
- Apoptosis, cytochrome c release, and cancer
- Mitochondrial Disease; Degenerative Disease and Defect
- Ageing and senescence
- Pharmacology and Biotechnology
- Genetic Defect; Knockdown; Overexpression
Diseases
Oxygen kinetics and oxidases
Ecophysiology and toxicology
Specific combinations
Examples for specific combinations are given for O2k-Publications:
- O2k-Publications: Human - Skeletal muscle
- O2k-Publications: Human - Heart
- O2k-Publications: Human vs. Rat: Nervous system
Instrumental and methodological
O2k-Manual
SUIT protocols
Other
Chronological
Lately added/edited references and authors
- MiPNet28.12 IOC167 Schroecken AT
- MiPNet28.13 IOC164 Innsbruck AT
- Yoshino 2021 Science
- Kim 2023 Nat Commun
- D-A-CH Algen Summit 2024 Bern CH
- Davis 2024 BEC
- Cardoso 2024 MitoFit
- Gnaiger 2009 Int J Biochem Cell Biol
- MitoFit
- Bioenerg Commun
- GRC Mitochondria and Chloroplasts 2024 Barcelona ES
- Mousa 2023 Cell Rep
- Nicholls 2013 Academic Press
- Onsager 1931 Phys Rev
- Krumschnabel 2014 Methods Enzymol
- Ciccone 2024 J Exp Biol
- MiPNet28.11 IOC163 Schroecken AT
- Brown 2021 Metrologia
- Metrologia
- Brown 2018 Metrologia
- Gnaiger 2020 MitoFit x
- Cooper 2012 Synthese
- IOC166 Ljubljana SI
- EMC2024 Ljubljana SI