O2k-Publications: Topics
- Mitochondria and cell research
Mitochondrial physiology: MiP areas
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
mt-Medicine (363 entries)
363
516
2
Exercise physiology;nutrition;life style
755
1049
3
Comparative MiP;environmental MiP
324
476
4
Pharmacology;toxicology
843
1040
5
mt-Biogenesis;mt-density
248
331
6
Genetic knockout;overexpression
653
722
7
Instruments;methods
273
416
Pathological states
- Alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Aging;senescence
275
417
2
Alzheimer's
71
94
3
Autism
7
11
4
Cancer
356
514
5
Cardiovascular
207
289
6
COPD
10
13
7
Diabetes
348
466
8
Inherited
64
99
9
Infectious
50
69
10
Myopathy
77
89
11
Neurodegenerative
169
235
12
Obesity
254
421
13
Parkinson's
67
104
14
Sepsis
74
85
15
Other
289
361
Stress conditions
- Alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Cell death
White, brown, beige fat tissue
93
156
2
Cryopreservation
41
67
3
Hypoxia
117
229
4
Ischemia-reperfusion
326
433
5
Mitochondrial disease
150
211
6
Oxidative stress;RONS
581
839
7
Permeability transition
71
96
8
Temperature: hypothermia; hyperthermia]
91
112
Organisms
- Mammals
- Model organisms
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Chicken
(» Birds)
5
7
2
Zebrafish
(» Fishes)
15
22
3
Drosophila
(» Hexapods)
65
91
4
Caenorhabditis elegans
(» Nematodes)
24
33
5
Artemia
(» Crustaceans)
12
19
6
Saccharomyces cerevisiae
(» Fungi)
61
88
7
Comparative MiP
324
476
- Non-mammals
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Birds
(» Chicken)
15
27
2
Reptiles
turtles, lizards, snakes, crocodiles, alligators
13
18
3
Amphibians
frogs, toads, salamanders
10
15
4
Fishes
bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); » Zebrafish
116
153
5
Hexapods
insects, springtails; » Drosophila
34
43
6
Crustaceans
crabs, shrimp, barnacles, etc.; » Artemia
19
40
7
Annelids
polychaetes, e.g. lugworm Arenicola marina, oligochaetes, leeches
3
20
8
Molluscs
gastropods, cephalopods, bivalves
25
42
9
Nematodes
» Caenorhabditis elegans
5
11
10
Other invertebrates
urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ...
11
21
11
Fungi
yeast, molds, mushrooms, etc.; » Saccharomyces cerevisiae
52
63
12
Plants
29
58
13
Protists
amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc.
42
59
14
Eubacteria
true bacteria, cyanobacteria, spirochetes
25
51
15
Archaea
archaebacteria
0
7
Tissues and cells
- Tissues - alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Fat
White, brown, beige fat tissue
187
262
2
Genital
92
123
3
Heart
723
935
4
Kidney
150
183
5
Liver
644
839
6
Lung;Gill
59
82
7
Nervous system
606
732
8
Skeletal muscle
1102
1366
- Cell types - alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Blood cells
254
320
2
Endothelial;epithelial;mesothelial cell
259
294
3
Fibroblast
206
270
4
Islet cell;pancreas;thymus
54
66
5
Lymphocyte
58
76
6
Platelet
121
151
7
Stem cells
36
48
- Cell lines - alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
CHO
14
16
2
HEK
95
116
3
HeLa
38
55
4
Neuroblastoma
42
49
5
HUVEC
19
22
6
Macrophage-derived cell lines
26
37
7
Other cells and cell lines
292
338
Preparations
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Intact organism
53
248
2
Intact organ
23
38
3
Intact cells
1162
1311
4
Permeabilized cells
714
752
5
Permeabilized tissue
1113
1207
6
Homogenate
375
419
7
Isolated mitochondria
1259
1566
8
SMP
Submitochondrial particles
10
28
9
Chloroplasts
2
10
10
Enzyme
39
102
11
Oxidase and biochemical oxidation
39
49
Enzymes
- Alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Adenine nucleotide translocase
ANT
21
27
2
Complex I
CI
460
606
3
Complex II;succinate dehydrogenase
CII
410
637
4
Complex III
CIII
300
362
5
Complex IV;cytochrome c oxidase
CIV
405
496
6
Complex V;ATP synthase
CV
219
266
7
Inner mt-membrane transporter
31
44
8
Marker enzyme
58
84
9
Supercomplex
48
77
10
TCA cycle and matrix dehydrogenases
Tricarboxylic acid cycle
81
108
11
Uncoupling protein
60
66
Regulation
- Alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
ADP
ADP kinetics
152
207
2
ATP production
78
123
3
Aerobic glycolysis
49
94
4
Amino acid
9
20
5
Calcium
106
179
6
Coupling efficiency;uncoupling
82
163
7
Cyt c
Cytochrome c
42
56
8
Fatty acid
FA substrate kinetics
127
159
9
Flux control
54
86
10
Inhibitor
Inhibitor kinetics
131
169
11
Ion;substrate transport
64
115
12
mt-Membrane potential
116
179
13
Oxygen kinetics
107
148
14
Q-junction effect
13
56
15
Redox state
58
98
16
Substrate
Fuel substrate kinetics
181
236
17
Temperature
Temperature dependence
73
100
18
Threshold;excess capacity
27
30
19
Uncoupler
Uncoupler kinetics
55
70
Coupling control states
#
O2k-Publications
MitoPedia: Coupling control states
Comment
O2k
Total
1
P
OXPHOS capacity
Oxidative phosphorylation capacity, saturating [ADP]
2858
3087
2
R
ROUTINE respiration
Physiological state, intact cells
892
979
3
E
Electron transfer system capacity
Maximal noncoupled respiration
0
0
4
L
LEAK respiration
Resting state, non-phosphorylating respiration
2603
2762
Pathway control states
#
O2k-Publications
MitoPedia: Pathway control states
Comment
O2k
Total
1
F
F-pathway control state
Fatty acid oxidation, level 5
607
751
2
N
N-pathway control state
NADH-linked, level 4
2467
2615
3
S
S-pathway control state
Succinate-linked, level 3
1679
1787
4
Gp
Gp-pathway control state
Glycerophosphate-linked, level 3
156
182
5
DQ
Duorquinol-linked, level 2
26
31
6
CIV
Complex IV single step
Ascorbate & TMPD, level 1
700
728
7
NS
NS-pathway control state
Convergent CI- and CII-linked electron flow to the Q-junction
1574
1631
8
Other
131
147
9
ROX
Residual oxygen consumption
includes non-mitochondrial respiration
1516
1568
MiPMap combinations - examples
- Examples for specific combinations
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
O2k-Publications: Human skeletal muscle
1102
1366
2
O2k-Publications: Human heart
723
935
3
O2k-Publications: Skeletal muscle - human vs mouse
39
48
- Browse data
O2k-Manuals and protocols and specific instrumental applications
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Oxygraph-2k
4699
4699
2
TIP2k
44
44
3
O2k-Fluorometry
348
354
4
O2k-pH ISE-Module
4
5
5
Nitric Oxide
8
8
6
TPP + ISE-Module
54
58
7
Calcium
11
11
8
O2k- Spectrophotometer
8
8
9
O2k-Manual
24
25
8
O2k-Protocol
71
93
9
Theoretical background
13
69
10
Instruments;methods
273
416
11
O2k-Fluorometry - Fluorophores
22
22
12
PBI Shredder
Homogenate preparation
20
22
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Twin-Flow respirometry
0
21
2
Separate DatLab applications
29
35