O2k-Publications: Topics

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O2k-Publications: Topics

Mitochondria and cell research
O2k-Publications: chronological
Publications in the MiPMap


See also » O2k-Publications - chronological: 2095


Mitochondrial physiology: MiP areas

# O2k-Publications MitoPedia: Comment O2k Total
1 mt-Medicine (236 entries) 236 321
2 Exercise physiology;nutrition;life style 297 442
3 Comparative MiP;environmental MiP 181 297
4 Pharmacology;toxicology 217 255
5 mt-Biogenesis;mt-density 164 217
6 Genetic knockout;overexpression 266 307
7 Instruments;methods 145 216


Pathological states

Alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Aging;senescence 130 206
2 Alzheimer's 33 48
3 Autism 0 0
4 Cancer 144 203
5 Cardiovascular 60 87
6 COPD 6 7
7 Diabetes 161 215
8 Inherited 32 47
9 Infectious 8 10
10 Myopathy 23 29
11 Neurodegenerative 84 118
12 Obesity 103 148
13 Parkinson's 35 50
14 Sepsis 36 42
15 Other 103 148


Stress conditions

Alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Cell death White, brown, beige fat tissue 58 100
2 Cryopreservation 14 31
3 Hypoxia 0 0
4 Ischemia-reperfusion 211 296
5 Mitochondrial disease 119 166
6 Oxidative stress;RONS 371 511
7 Permeability transition 36 47
8 Temperature: hypothermia; hyperthermia] 40 50


Organisms

Mammals
# O2k-Publications MitoPedia: Comment O2k Total
1 Human 623 918
2 Pig 48 59
3 Horse 16 22
4 Bovines 13 51
5 Cat 2 3
6 Dog 7 24
7 Rabbit 11 15
8 Mouse 537 682
9 Rat 471 631
10 Guinea pig 11 24
11 Other mammals including only mammals that are not listed as mammalian species above 30 54
Model organisms
# O2k-Publications MitoPedia: Comment O2k Total
1 Chicken Birds) 2 3
2 Zebrafish Fishes) 3 8
3 Drosophila Hexapods) 28 37
4 Caenorhabditis elegans Nematodes) 7 11
5 Artemia Crustaceans) 11 18
6 Saccharomyces cerevisiae Fungi) 38 52
7 Comparative MiP 181 297


Non-mammals
# O2k-Publications MitoPedia: Comment O2k Total
1 Birds Chicken) 8 18
2 Reptiles turtles, lizards, snakes, crocodiles, alligators 9 13
3 Amphibians frogs, toads, salamanders 7 10
4 Fishes bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); » Zebrafish 56 84
5 Hexapods insects, springtails; » Drosophila 24 32
6 Crustaceans crabs, shrimp, barnacles, etc.; » Artemia 15 31
7 Annelids polychaetes, e.g. lugworm Arenicola marina, oligochaetes, leeches 3 15
8 Molluscs gastropods, cephalopods, bivalves 11 21
9 Nematodes » Caenorhabditis elegans 3 7
10 Other invertebrates urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ... 9 13
11 Fungi yeast, molds, mushrooms, etc.; » Saccharomyces cerevisiae 39 49
12 Plants 15 32
13 Protists amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc. 12 21
14 Eubacteria true bacteria, cyanobacteria, spirochetes 11 25
15 Archaea archaebacteria 0 6


Tissues and cells

Tissues - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Fat White, brown, beige fat tissue 72 91
2 Genital 42 56
3 Heart 360 501
4 Kidney 61 83
5 Liver 322 435
6 Lung;Gill 26 39
7 Nervous system 290 366
8 Skeletal muscle 519 687


Cell types - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Blood cells 102 134
2 Endothelial;epithelial;mesothelial cell 116 137
3 Fibroblast 98 134
4 Islet cell;pancreas;thymus 26 34
5 Lymphocyte 35 43
6 Platelet 34 40
7 Stem cells 19 22


Cell lines - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 CHO 12 12
2 HEK 29 42
3 HeLa 16 25
4 Neuroblastoma 18 19
5 HUVEC 18 20
6 Macrophage-derived cell lines 15 21
7 Other cells and cell lines 157 194


Preparations

# O2k-Publications MitoPedia: Comment O2k Total
1 Intact organism 35 101
2 Intact organ 21 32
3 Intact cells 482 551
4 Permeabilized cells 263 280
5 Permeabilized tissue 525 590
6 Homogenate 141 171
7 Isolated mitochondria 636 859
8 SMP Submitochondrial particles 9 19
9 Chloroplasts 1 9
10 Enzyme 35 59
11 Oxidase and biochemical oxidation 31 34


Enzymes

Alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Adenine nucleotide translocase ANT 17 20
2 Complex I CI 234 300
3 Complex II;succinate dehydrogenase CII 198 255
4 Complex III CIII 131 168
5 Complex IV;cytochrome c oxidase CIV 209 268
6 Complex V;ATP synthase CV 91 122
7 Inner mt-membrane transporter 21 29
8 Marker enzyme 47 66
9 Supercomplex 25 34
10 TCA cycle and matrix dehydrogenases Tricarboxylic acid cycle 44 59
11 Uncoupling protein 32 36


Regulation

Alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 ADP ADP kinetics 116 153
2 ATP production 39 64
3 Aerobic glycolysis 37 69
4 Amino acid 3 9
5 Calcium 37 61
6 Coupling efficiency;uncoupling 60 103
7 Cyt c Cytochrome c 34 42
8 Fatty acid FA substrate kinetics 86 101
9 Flux control 36 47
10 Inhibitor Inhibitor kinetics 89 109
11 Ion;substrate transport 35 60
12 mt-Membrane potential 63 93
13 Oxygen kinetics 79 104
14 Q-junction effect 603
"Q-junction effect" is not in the list of possible values (Aerobic glycolysis, ADP, ATP, ATP production, AMP, Calcium, Coupling efficiency;uncoupling, Cyt c, Flux control, Inhibitor, Ion;substrate transport, mt-Membrane potential, Oxygen kinetics, PCr;Cr, pH, Phosphate, Redox state, Substrate, Temperature, Threshold;excess capacity, Uncoupler, Fatty acid, Amino acid) for this property.
875
"Q-junction effect" is not in the list of possible values (Aerobic glycolysis, ADP, ATP, ATP production, AMP, Calcium, Coupling efficiency;uncoupling, Cyt c, Flux control, Inhibitor, Ion;substrate transport, mt-Membrane potential, Oxygen kinetics, PCr;Cr, pH, Phosphate, Redox state, Substrate, Temperature, Threshold;excess capacity, Uncoupler, Fatty acid, Amino acid) for this property.
15 Redox state 34 53
16 Substrate Fuel substrate kinetics 148 196
17 Temperature Temperature dependence 46 66
18 Threshold;excess capacity 23 26
19 Uncoupler Uncoupler kinetics 39 48


Coupling control states

# O2k-Publications MitoPedia: Coupling control states Comment O2k Total
1 P OXPHOS OXPHOS capacity Oxidative phosphorylation capacity, saturating [ADP] 1215 1372
2 R ROUTINE ROUTINE respiration Physiological state, intact cells 351 401
3 E ETS Electron transfer system capacity Maximal noncoupled respiration 714 781
4 L LEAK LEAK respiration Resting state, non-phosphorylating respiration 857 941


Pathway control states

# O2k-Publications MitoPedia: Pathway control states Comment O2k Total
1 F F-pathway control state Fatty acid oxidation, level 5 206 286
2 N N-pathway control state NADH-linked, level 4 855 936
3 S S-pathway control state Succinate-linked, level 3 631 682
4 Gp Gp-pathway control state Glycerophosphate-linked, level 3 48 57
5 DQ Duorquinol-linked, level 2 1 1
6 CIV Complex IV single step Ascorbate & TMPD, level 1 235 251
7 NS NS-pathway control state Convergent CI- and CII-linked electron flow to the Q-junction 479 505
8 Other 98 104
9 ROX ROX Residual oxygen consumption includes non-mitochondrial respiration 412 433


MiPMap combinations - examples

Examples for specific combinations
# O2k-Publications MitoPedia: Comment O2k Total
1 O2k-Publications: Human skeletal muscle 519 687
2 O2k-Publications: Human heart 360 501
3 O2k-Publications: Skeletal muscle - human vs mouse 20 28
Browse data


O2k-Manuals and protocols and specific instrumental applications

# O2k-Publications MitoPedia: Comment O2k Total
1 Oxygraph-2k 0 2095
2 TIP2k 37 37
3 O2k-Fluorometry 78 80
4 O2k-pH ISE-Module 4 5
5 Nitric Oxide 8 8
6 TPP + ISE-Module 32 33
7 Calcium 10 10
8 O2k- Spectrophotometer 9 9
9 O2k-Manual 18 20
8 O2k-Protocol 45 63
9 Theoretical background 11 56
10 Instruments;methods 145 216
11 O2k-Fluorometry - Fluorophores 30 30
12 PBI Shredder Homogenate preparation 16 17
# O2k-Publications MitoPedia: Comment O2k Total
1 Twin-Flow respirometry 0 20
2 Separate DatLab applications 12 19