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Difference between revisions of "Cell ergometry"

From Bioblast
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== Spiroergometry ==
== Spiroergometry ==
''V''<sub>O2max</sub> or ''V''<sub>O2peak</sub> in cycle or treadmill '''spiroergometry''' is expressed in units of [ml O<sub>2</sub>·min<sup>-1</sup>·kg<sup>-1</sup>] body mass. 1 ml oxygen at STPD is equivalent to 22.392 mmol O<sub>2</sub>. Therefore, multiply by 1000/(22.392·60)=0.744 to convert ''V''<sub>O2peak</sub> to ''J''<sub>O2peak</sub> expressed in ''SI'' units [nmol·s<sup>-1</sup>·g<sup>-1</sup>]:
:::: ''V''<sub>O2max</sub> or ''V''<sub>O2peak</sub> in cycle or treadmill '''spiroergometry''' is expressed in units of [ml O<sub>2</sub>·min<sup>-1</sup>·kg<sup>-1</sup>] body mass. 1 ml oxygen at STPD is equivalent to 22.392 mmol O<sub>2</sub>. Therefore, multiply by 1000/(22.392·60)=0.744 to convert ''V''<sub>O2peak</sub> to ''J''<sub>O2peak</sub> expressed in ''SI'' units [nmol·s<sup>-1</sup>·g<sup>-1</sup>]:
  <big>1 ml O<sub>2</sub>·min<sup>-1</sup>·kg<sup>-1</sup> = 0.744 µmol·s<sup>-1</sup>·kg<sup>-1</sup></big>
  <big>1 ml O<sub>2</sub>·min<sup>-1</sup>·kg<sup>-1</sup> = 0.744 µmol·s<sup>-1</sup>·kg<sup>-1</sup></big>


''V''<sub>O2peak</sub> (''J''<sub>O2peak</sub>) typically declines from 70 to 25 ml O<sub>2</sub>·min<sup>-1</sup>·kg<sup>-1</sup> (50 to 20 µmol·s<sup>-1</sup>·kg<sup>-1</sup>) in the range of healthy trained to obese untrained humans.
:::: ''V''<sub>O2peak</sub> (''J''<sub>O2peak</sub>) typically declines from 70 to 25 ml O<sub>2</sub>·min<sup>-1</sup>·kg<sup>-1</sup> (50 to 20 µmol·s<sup>-1</sup>·kg<sup>-1</sup>) in the range of healthy trained to obese untrained humans.




== Cell ergometry: intact cells ==
== Cell ergometry: intact cells ==
=== Respiratory coupling states in intact cells ===
=== Respiratory coupling states in intact cells ===
:: [[Image:R.jpg|link=ROUTINE respiration|ROUTINE]] [[ROUTINE respiration]], ''R'' = ''R´''-ROX
:::: [[Image:R.jpg|link=ROUTINE respiration|ROUTINE]] [[ROUTINE respiration]], ''R'' = ''R´''-ROX
:::::::: [[Image:R-L.jpg|50 px|link=Free ROUTINE activity |Free ROUTINE activity]] [[Free ROUTINE activity]], ''≈R'' = ''R-L''
:::::::: [[Image:R-L.jpg|50 px|link=Free ROUTINE activity |Free ROUTINE activity]] [[Free ROUTINE activity]], ''≈R'' = ''R-L''
:: [[Image:E.jpg|link=ETS capacity|ETS]] [[ETS capacity]], ''E'' = ''E´''-ROX
:::: [[Image:E.jpg|link=ETS capacity|ETS]] [[ETS capacity]], ''E'' = ''E´''-ROX
:::::::: [[Image:E-L.jpg|50 px|link=Free ETS capacity |Free ETS capacity]] [[Free ETS capacity]], ''≈E'' = ''E-L''
:::::::: [[Image:E-L.jpg|50 px|link=Free ETS capacity |Free ETS capacity]] [[Free ETS capacity]], ''≈E'' = ''E-L''
:::::::: [[Image:ExR.jpg|60 px|link=Excess E-R capacity|Excess ''E-R'' capacity]] [[Excess E-R capacity|Excess ''E-R'' capacity]], ''ExR'' = ''E-R''
:::::::: [[Image:ExR.jpg|60 px|link=Excess E-R capacity|Excess ''E-R'' capacity]] [[Excess E-R capacity|Excess ''E-R'' capacity]], ''ExR'' = ''E-R''
:: [[Image:L.jpg|link=LEAK respiration|LEAK]] [[LEAK respiration]], ''L'' = ''L´''-ROX
:::: [[Image:L.jpg|link=LEAK respiration|LEAK]] [[LEAK respiration]], ''L'' = ''L´''-ROX
:: [[Image:ROX.jpg|link=Residual oxygen consumption|ROX]] [[Residual oxygen consumption]], ROX (subtracted from apparent fluxes (''R´, E´, L´'')
:::: [[Image:ROX.jpg|link=Residual oxygen consumption|ROX]] [[Residual oxygen consumption]], ROX (subtracted from apparent fluxes (''R´, E´, L´'')




=== Respiratory coupling control ratios in intact cells ===
=== Respiratory coupling control ratios in intact cells ===
::[[Image:L over R.jpg|50 px|link=L/R coupling control ratio |''L/R'' coupling control ratio]] [[L/R coupling control ratio |''L/R'' coupling control ratio]], ''L/R''
:::: [[Image:L over R.jpg|50 px|link=L/R coupling control ratio |''L/R'' coupling control ratio]] [[L/R coupling control ratio |''L/R'' coupling control ratio]], ''L/R''
:: [[Image:L over E.jpg|50 px|link=LEAK control ratio |LEAK control ratio]] [[LEAK control ratio]], ''L/E''
:::: [[Image:L over E.jpg|50 px|link=LEAK control ratio |LEAK control ratio]] [[LEAK control ratio]], ''L/E''
:: [[Image:R over E.jpg|50 px|link=ROUTINE control ratio |ROUTINE control ratio]] [[ROUTINE control ratio]], ''R/E''
:::: [[Image:R over E.jpg|50 px|link=ROUTINE control ratio |ROUTINE control ratio]] [[ROUTINE control ratio]], ''R/E''




=== Respiratory coupling control factors in intact cells ===
=== Respiratory coupling control factors in intact cells ===
:: [[Image:j--R.jpg|50 px|link=ROUTINE coupling efficiency |ROUTINE coupling efficiency]] [[ROUTINE coupling efficiency]]: ''j<sub>≈R</sub>'' = ''≈R/R'' =(''R-L'')/''R'' = 1-''L/R''
:::: [[Image:j--R.jpg|50 px|link=ROUTINE coupling efficiency |ROUTINE coupling efficiency]] [[ROUTINE coupling efficiency]]: ''j<sub>≈R</sub>'' = ''≈R/R'' =(''R-L'')/''R'' = 1-''L/R''
:: [[Image:j--E.jpg|50 px|link=ETS coupling efficiency |ETS coupling efficiency]] [[ETS coupling efficiency]], ''E-L'' control factor: ''j<sub>≈E</sub>'' = ''≈E/E'' = (''E-L'')/''E'' = 1-''L/E''
:::: [[Image:j--E.jpg|50 px|link=ETS coupling efficiency |ETS coupling efficiency]] [[ETS coupling efficiency]], ''E-L'' control factor: ''j<sub>≈E</sub>'' = ''≈E/E'' = (''E-L'')/''E'' = 1-''L/E''
:: [[Image:jExR.jpg|50 px|link=Excess E-R capacity factor |Excess ''E-R'' capacity factor]] [[Excess E-R capacity factor |Excess ''E-R'' capacity factor]], ''E-R'' coupling control factor: ''j<sub>ExR</sub>'' = (''E-R'')/''E'' = 1-''R/E''
:::: [[Image:jExR.jpg|50 px|link=Excess E-R capacity factor |Excess ''E-R'' capacity factor]] [[Excess E-R capacity factor |Excess ''E-R'' capacity factor]], ''E-R'' coupling control factor: ''j<sub>ExR</sub>'' = (''E-R'')/''E'' = 1-''R/E''
:: [[Image:NetR over E.jpg|60 px|link=NetROUTINE control ratio |netROUTINE control ratio]] [[netROUTINE control ratio]], ''≈R/E'' control ratio: ''≈R/E'' = (''R-L'')/''E''
:::: [[Image:NetR over E.jpg|60 px|link=NetROUTINE control ratio |netROUTINE control ratio]] [[netROUTINE control ratio]], ''≈R/E'' control ratio: ''≈R/E'' = (''R-L'')/''E''




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== Cell ergometry: permeabilized cells ==
== Cell ergometry: permeabilized cells ==
=== Respiratory coupling states in mt-preparations ===
=== Respiratory coupling states in mt-preparations ===
:: [[Image:P.jpg|link=OXPHOS capacity|OXPHOS]] [[OXPHOS capacity]], ''P'' = ''P´''-ROX
:::: [[Image:P.jpg|link=OXPHOS capacity|OXPHOS]] [[OXPHOS capacity]], ''P'' = ''P´''-ROX
:::::::: [[Image:P-L.jpg|50 px|link=Free OXPHOS capacity |Free OXPHOS capacity]] [[Free OXPHOS capacity]], ''≈P'' = ''P-L''
:::::::: [[Image:P-L.jpg|50 px|link=Free OXPHOS capacity |Free OXPHOS capacity]] [[Free OXPHOS capacity]], ''≈P'' = ''P-L''
:: [[Image:E.jpg|link=ETS capacity|ETS]] [[ETS capacity]], ''E'' = ''E´''-ROX
:::: [[Image:E.jpg|link=ETS capacity|ETS]] [[ETS capacity]], ''E'' = ''E´''-ROX
:::::::: [[Image:E-L.jpg|50 px|link=Free ETS capacity |Free ETS capacity]] [[Free ETS capacity]], ''≈E'' = ''E-L''
:::::::: [[Image:E-L.jpg|50 px|link=Free ETS capacity |Free ETS capacity]] [[Free ETS capacity]], ''≈E'' = ''E-L''
:::::::: [[Image:ExP.jpg|60 px|link=Excess E-P capacity |Excess ''E-P'' capacity]] [[Excess E-P capacity |Excess ''E-P'' capacity]], ''ExP'' = ''E-P''
:::::::: [[Image:ExP.jpg|60 px|link=Excess E-P capacity |Excess ''E-P'' capacity]] [[Excess E-P capacity |Excess ''E-P'' capacity]], ''ExP'' = ''E-P''
::[[Image:L.jpg|link=LEAK respiration|LEAK]] [[LEAK respiration]], ''L'' = ''L´''-ROX
::::[[Image:L.jpg|link=LEAK respiration|LEAK]] [[LEAK respiration]], ''L'' = ''L´''-ROX
:: [[Image:ROX.jpg|link=Residual oxygen consumption|ROX]] [[Residual oxygen consumption]], ROX (subtracted from ''P´, E´, L´'')
:::: [[Image:ROX.jpg|link=Residual oxygen consumption|ROX]] [[Residual oxygen consumption]], ROX (subtracted from ''P´, E´, L´'')




=== Respiratory coupling control ratios in mt-preparations ===
=== Respiratory coupling control ratios in mt-preparations ===
::[[Image:L over P.jpg|50 px|link=L/P coupling control ratio |''L/P'' coupling control ratio]] [[L/P coupling control ratio |''L/P'' coupling control ratio]]: ''L/P''
:::: [[Image:L over P.jpg|50 px|link=L/P coupling control ratio |''L/P'' coupling control ratio]] [[L/P coupling control ratio |''L/P'' coupling control ratio]]: ''L/P''
:: [[Image:L over E.jpg|50 px|link=LEAK control ratio |LEAK control ratio]] [[LEAK control ratio]], ''L/E''
:::: [[Image:L over E.jpg|50 px|link=LEAK control ratio |LEAK control ratio]] [[LEAK control ratio]], ''L/E''
:: [[Image:P over E.jpg|50 px|link=OXPHOS control ratio |OXPHOS control ratio]] [[OXPHOS control ratio]], ''P/E''
:::: [[Image:P over E.jpg|50 px|link=OXPHOS control ratio |OXPHOS control ratio]] [[OXPHOS control ratio]], ''P/E''




=== Respiratory coupling control factors in mt-preparations ===
=== Respiratory coupling control factors in mt-preparations ===
:: [[Image:j--P.jpg|50 px|link=OXPHOS coupling efficiency |OXPHOS coupling efficiency]] [[OXPHOS coupling efficiency]], (''P-L'' or ''≈P'' control factor): ''j<sub>≈P</sub>'' = ''≈P/P'' = (''P-L'')/''P'' = 1-''L/P''
:::: [[Image:j--P.jpg|50 px|link=OXPHOS coupling efficiency |OXPHOS coupling efficiency]] [[OXPHOS coupling efficiency]], (''P-L'' or ''≈P'' control factor): ''j<sub>≈P</sub>'' = ''≈P/P'' = (''P-L'')/''P'' = 1-''L/P''
:: [[Image:j--E.jpg|50 px|link=ETS coupling efficiency |ETS coupling efficiency]] [[ETS coupling efficiency]], ''E-L'' control factor: ''j<sub>≈E</sub>'' = ''≈E/E'' = (''E-L'')/''E'' = 1-''L/E''
:::: [[Image:j--E.jpg|50 px|link=ETS coupling efficiency |ETS coupling efficiency]] [[ETS coupling efficiency]], ''E-L'' control factor: ''j<sub>≈E</sub>'' = ''≈E/E'' = (''E-L'')/''E'' = 1-''L/E''
:: [[Image:jExP.jpg|50 px|link=Excess E-P capacity factor |Excess ''E-P'' capacity factor]] [[Excess E-P capacity factor |Excess ''E-P'' capacity factor]], ''E-P'' coupling control factor: ''j<sub>ExP</sub>'' = (''E-P'')/''E'' = 1-''P/E''
:::: [[Image:jExP.jpg|50 px|link=Excess E-P capacity factor |Excess ''E-P'' capacity factor]] [[Excess E-P capacity factor |Excess ''E-P'' capacity factor]], ''E-P'' coupling control factor: ''j<sub>ExP</sub>'' = (''E-P'')/''E'' = 1-''P/E''
:: [[Image:NetP over E.jpg|60 px|link=NetOXPHOS control ratio |netOXPHOS control ratio]] [[netOXPHOS control ratio]], ''≈P/E'' control ratio: ''≈P/E'' = (''P-L'')/''E''
:::: [[Image:NetP over E.jpg|60 px|link=NetOXPHOS control ratio |netOXPHOS control ratio]] [[netOXPHOS control ratio]], ''≈P/E'' control ratio: ''≈P/E'' = (''P-L'')/''E''

Revision as of 22:28, 17 February 2016


high-resolution terminology - matching measurements at high-resolution


Cell ergometry

Description

Biochemical cell ergometry aims at measurement of JO2max (compare VO2max or VO2peak in exercise ergometry of humans and animals) of cell respiration linked to phosphorylation of ADP to ATP. The corresponding OXPHOS capacity is based on saturating concentrations of ADP, [ADP]*, and inorganic phosphate, [Pi]*, available to the mitochondria. This is metabolically opposite to uncoupling respiration, which yields ETS capacity. The OXPHOS state can be established experimentally by selective permeabilization of cell membranes with maintenance of intact mitochondria, titrations of ADP and Pi to evaluate kinetically saturating conditions, and establishing fuel substrate combinations which reconstitute physiological TCA cycle function. Uncoupler titrations are applied to determine the apparent ETS excess over OXPHOS capacity and to calculate OXPHOS- and ETS coupling efficiencies, j≈P and j≈E. These normalized flux ratios are the basis to calculate the ergometric or ergodynamic efficiency, ε = j · f, where f is the normalized force ratio.

» MiPNet article


Reference: Gnaiger 2014 MitoPathways


MitoPedia concepts: Respiratory state 


MitoPedia methods: Respirometry 


MitoPedia O2k and high-resolution respirometry: "SUIT protocol" is not in the list (O2k hardware, DatLab, Oroboros QM, O2k-Open Support, O2k-Respirometry, O2k-FluoRespirometry) of allowed values for the "MitoPedia O2k and high-resolution respirometry" property. SUIT protocol"SUIT protocol" is not in the list (O2k hardware, DatLab, Oroboros QM, O2k-Open Support, O2k-Respirometry, O2k-FluoRespirometry) of allowed values for the "MitoPedia O2k and high-resolution respirometry" property. 



Cell ergometry and OXPHOS

Publications in the MiPMap
Gnaiger E (2015) Cell ergometry and OXPHOS. Mitochondr Physiol Network 2015-01-18.


OROBOROS (2015) MiPNet

Abstract: Spiroergometry on the organismic level is compared to cell ergometry as OXPHOS analysis on the cellular level.


O2k-Network Lab: AT Innsbruck Gnaiger E


Labels:




Regulation: Coupling efficiency;uncoupling  Coupling state: LEAK, OXPHOS, ETS"ETS" is not in the list (LEAK, ROUTINE, OXPHOS, ET) of allowed values for the "Coupling states" property. 

HRR: Theory 



960px


Figure 1: Coupling control protocol in the intact cell


Spiroergometry

VO2max or VO2peak in cycle or treadmill spiroergometry is expressed in units of [ml O2·min-1·kg-1] body mass. 1 ml oxygen at STPD is equivalent to 22.392 mmol O2. Therefore, multiply by 1000/(22.392·60)=0.744 to convert VO2peak to JO2peak expressed in SI units [nmol·s-1·g-1]:
1 ml O2·min-1·kg-1 = 0.744 µmol·s-1·kg-1
VO2peak (JO2peak) typically declines from 70 to 25 ml O2·min-1·kg-1 (50 to 20 µmol·s-1·kg-1) in the range of healthy trained to obese untrained humans.


Cell ergometry: intact cells

Respiratory coupling states in intact cells

ROUTINE ROUTINE respiration, R = -ROX
Free ROUTINE activity Free ROUTINE activity, ≈R = R-L
ETS ETS capacity, E = -ROX
Free ETS capacity Free ETS capacity, ≈E = E-L
Excess E-R capacity Excess E-R capacity, ExR = E-R
LEAK LEAK respiration, L = -ROX
ROX Residual oxygen consumption, ROX (subtracted from apparent fluxes (R´, E´, L´)


Respiratory coupling control ratios in intact cells

L/R coupling control ratio L/R coupling control ratio, L/R
LEAK control ratio LEAK control ratio, L/E
ROUTINE control ratio ROUTINE control ratio, R/E


Respiratory coupling control factors in intact cells

ROUTINE coupling efficiency ROUTINE coupling efficiency: j≈R = ≈R/R =(R-L)/R = 1-L/R
ETS coupling efficiency ETS coupling efficiency, E-L control factor: j≈E = ≈E/E = (E-L)/E = 1-L/E
Excess E-R capacity factor Excess E-R capacity factor, E-R coupling control factor: jExR = (E-R)/E = 1-R/E
netROUTINE control ratio netROUTINE control ratio, ≈R/E control ratio: ≈R/E = (R-L)/E


Cell ergometry: permeabilized cells

Respiratory coupling states in mt-preparations

OXPHOS OXPHOS capacity, P = -ROX
Free OXPHOS capacity Free OXPHOS capacity, ≈P = P-L
ETS ETS capacity, E = -ROX
Free ETS capacity Free ETS capacity, ≈E = E-L
Excess E-P capacity Excess E-P capacity, ExP = E-P
LEAK LEAK respiration, L = -ROX
ROX Residual oxygen consumption, ROX (subtracted from P´, E´, L´)


Respiratory coupling control ratios in mt-preparations

L/P coupling control ratio L/P coupling control ratio: L/P
LEAK control ratio LEAK control ratio, L/E
OXPHOS control ratio OXPHOS control ratio, P/E


Respiratory coupling control factors in mt-preparations

OXPHOS coupling efficiency OXPHOS coupling efficiency, (P-L or ≈P control factor): j≈P = ≈P/P = (P-L)/P = 1-L/P
ETS coupling efficiency ETS coupling efficiency, E-L control factor: j≈E = ≈E/E = (E-L)/E = 1-L/E
Excess E-P capacity factor Excess E-P capacity factor, E-P coupling control factor: jExP = (E-P)/E = 1-P/E
netOXPHOS control ratio netOXPHOS control ratio, ≈P/E control ratio: ≈P/E = (P-L)/E