Difference between revisions of "O2k-Publications: Topics"
From Bioblast
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See also >>> [[O2k-Publications|<big>O2k-Publications - chronological: {{#ask:[[Category:Publications]][[Instrument and method::Oxygraph-2k]] |format=count | See also >>> [[O2k-Publications|<big>O2k-Publications - chronological: {{#ask:[[Category:Publications]][[Instrument and method::Oxygraph-2k]] |format=count | ||
}}'''</big>]] | }}'''</big>]] | ||
== O2k-Publications in the MiPMap: selected fields of Oxygraph-2k applications == | == O2k-Publications in the MiPMap: selected fields of Oxygraph-2k applications == | ||
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* [[O2k-Publications: mt-Biogenesis;mt-density|mt-Biogenesis;mt-density]] •• [[O2k-Publications: Genetic knockout; overexpression|Genetic knockout;overexpression]] | * [[O2k-Publications: mt-Biogenesis;mt-density|mt-Biogenesis;mt-density]] •• [[O2k-Publications: Genetic knockout; overexpression|Genetic knockout;overexpression]] | ||
* [[O2k-Publications: Instruments;methods|Instruments;methods]] | * [[O2k-Publications: Instruments;methods|Instruments;methods]] | ||
== Pathological states == | == Pathological states == | ||
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* [[O2k-Publications: Sepsis|Sepsis]] | * [[O2k-Publications: Sepsis|Sepsis]] | ||
* [[O2k-Publications: Other|Other]] | * [[O2k-Publications: Other|Other]] | ||
== Stress conditions == | == Stress conditions == | ||
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* [[O2k-Publications: Comparative MiP;environmental MiP|Comparative MiP]] •• [[O2k-Publications: Plants |Plants]] | * [[O2k-Publications: Comparative MiP;environmental MiP|Comparative MiP]] •• [[O2k-Publications: Plants |Plants]] | ||
* [[O2k-Publications: Organisms|Further information]] | * [[O2k-Publications: Organisms|Further information]] | ||
== Tissues, cell types and cell lines == | == Tissues, cell types and cell lines == | ||
* [[O2k-Publications: Heart|Heart]] •• [[O2k-Publications: Skeletal muscle|Skeletal muscle]] •• [[O2k-Publications: Nervous system|Nervous system]] •• [[O2k-Publications: Liver|Liver]] •• [[O2k-Publications: Kidney|Kidney]] •• [[O2k-Publications: Lung; gill|Lung; gill]] •• [[O2k-Publications: Fat|Fat]] •• [[O2k-Publications: Genital|Genital]] •• [[O2k-Publications: Endothelial; Epithelial; Mesothelial Cell|Endothelial;epithelial;mesothelial cell]] •• [[O2k-Publications: Islet Cell; Pancreas; Thymus|Islet cell;pancreas;thymus]] •• [[O2k-Publications: Blood cells|Blood cells]] | * [[O2k-Publications: Heart|Heart]] •• [[O2k-Publications: Skeletal muscle|Skeletal muscle]] •• [[O2k-Publications: Nervous system|Nervous system]] •• [[O2k-Publications: Liver|Liver]] •• [[O2k-Publications: Kidney|Kidney]] •• [[O2k-Publications: Lung; gill|Lung; gill]] •• [[O2k-Publications: Fat|Fat]] •• [[O2k-Publications: Genital|Genital]] •• [[O2k-Publications: Endothelial; Epithelial; Mesothelial Cell|Endothelial;epithelial;mesothelial cell]] •• [[O2k-Publications: Islet Cell; Pancreas; Thymus|Islet cell;pancreas;thymus]] •• [[O2k-Publications: Blood cells|Blood cells]] | ||
* [[O2k-Publications: CHO|CHO]] •• [[O2k-Publications: HEK|HEK]] •• [[O2k-Publications: HeLa|HeLa]] •• [[O2k-Publications: Neuroblastoma|Neuroblastoma]] •• [[O2k-Publications: Fibroblast|Fibroblast]] •• [[O2k-Publications: HUVEC|HUVEC]] •• [[O2k-Publications: Macrophage-derived cell lines|Macrophage-derived cell lines]] •• [[O2k-Publications: Lymphocyte|Lymphocyte]] •• [[O2k-Publications: Platelet|Platelet]] •• [[O2k-Publications: Stem cells|Stem cells]] •• [[O2k-Publications: Other cell lines|Other cell lines]] | * [[O2k-Publications: CHO|CHO]] •• [[O2k-Publications: HEK|HEK]] •• [[O2k-Publications: HeLa|HeLa]] •• [[O2k-Publications: Neuroblastoma|Neuroblastoma]] •• [[O2k-Publications: Fibroblast|Fibroblast]] •• [[O2k-Publications: HUVEC|HUVEC]] •• [[O2k-Publications: Macrophage-derived cell lines|Macrophage-derived cell lines]] •• [[O2k-Publications: Lymphocyte|Lymphocyte]] •• [[O2k-Publications: Platelet|Platelet]] •• [[O2k-Publications: Stem cells|Stem cells]] •• [[O2k-Publications: Other cell lines|Other cell lines]] | ||
== Preparations == | == Preparations == | ||
* [[O2k-Publications: Intact Organism|Intact organism]] •• [[O2k-Publications: Intact Organ|Intact organ]] •• [[O2k-Publications: Intact cells|Intact cells]] •• [[O2k-Publications: Permeabilized cells|Permeabilized cells]] •• [[O2k-Publications: Permeabilized_tissue|Permeabilized tissue]] •• [[O2k-Publications: Homogenate|Homogenate]] •• [[O2k-Publications: Isolated Mitochondria|Isolated mitochondria]] •• [[O2k-Publications: SMP|SMP]] •• [[O2k-Publications: Chloroplasts|Chloroplasts]] •• [[O2k-Publications: Enzyme|Enzyme]] •• [[O2k-Publications: Oxidase; Biochemical Oxidation|Oxidase and biochemical oxidation]] | * [[O2k-Publications: Intact Organism|Intact organism]] •• [[O2k-Publications: Intact Organ|Intact organ]] •• [[O2k-Publications: Intact cells|Intact cells]] •• [[O2k-Publications: Permeabilized cells|Permeabilized cells]] •• [[O2k-Publications: Permeabilized_tissue|Permeabilized tissue]] •• [[O2k-Publications: Homogenate|Homogenate]] •• [[O2k-Publications: Isolated Mitochondria|Isolated mitochondria]] •• [[O2k-Publications: SMP|SMP]] •• [[O2k-Publications: Chloroplasts|Chloroplasts]] •• [[O2k-Publications: Enzyme|Enzyme]] •• [[O2k-Publications: Oxidase; Biochemical Oxidation|Oxidase and biochemical oxidation]] | ||
== Regulation == | == Regulation == | ||
* [[O2k-Publications: Flux control|Flux control]] •• [[O2k-Publications: Coupling efficiency;uncoupling|Coupling efficiency;uncoupling]] •• [[O2k-Publications: Uncoupler|Uncoupler]] •• [[O2k-Publications: Inhibitor|Inhibitor]] •• [[O2k-Publications: Temperature|Temperature]] •• [[O2k-Publications: Oxygen kinetics|Oxygen kinetics]] •• [[O2k-Publications: Substrate|Substrate]] | * [[O2k-Publications: Flux control|Flux control]] •• [[O2k-Publications: Coupling efficiency;uncoupling|Coupling efficiency;uncoupling]] •• [[O2k-Publications: Uncoupler|Uncoupler]] •• [[O2k-Publications: Inhibitor|Inhibitor]] •• [[O2k-Publications: Temperature|Temperature]] •• [[O2k-Publications: Oxygen kinetics|Oxygen kinetics]] •• [[O2k-Publications: Substrate|Substrate]] | ||
== Enzymes == | == Enzymes == | ||
* [[O2k-Publications: Adenine nucleotide translocase|Adenine nucleotide translocase]] •• [[O2k-Publications: Complex I|Complex I]] •• [[O2k-Publications: Complex II;succinate dehydrogenase|Complex II;succinate dehydrogenase]] •• [[O2k-Publications: Complex III|Complex III]] •• [[O2k-Publications: Complex IV;cytochrome c oxidase|Complex IV;cytochrome c oxidase]] •• [[O2k-Publications: Complex V;ATP synthase|Complex V;ATP synthase]] •• [[O2k-Publications: Complex V;ATP synthase|Complex V;ATP synthase]] •• [[O2k-Publications: Inner mt-membrane transporter|Inner mt-membrane transporter]] •• [[O2k-Publications: Marker enzyme|Marker enzyme]] •• [[O2k-Publications: Supercomplex|Supercomplex]] •• [[O2k-Publications: TCA cycle and matrix dehydrogenases|TCA cycle and matrix dehydrogenases]] •• [[O2k-Publications: Uncoupling protein|Uncoupling protein]] | * [[O2k-Publications: Adenine nucleotide translocase|Adenine nucleotide translocase]] •• [[O2k-Publications: Complex I|Complex I]] •• [[O2k-Publications: Complex II;succinate dehydrogenase|Complex II;succinate dehydrogenase]] •• [[O2k-Publications: Complex III|Complex III]] •• [[O2k-Publications: Complex IV;cytochrome c oxidase|Complex IV;cytochrome c oxidase]] •• [[O2k-Publications: Complex V;ATP synthase|Complex V;ATP synthase]] •• [[O2k-Publications: Complex V;ATP synthase|Complex V;ATP synthase]] •• [[O2k-Publications: Inner mt-membrane transporter|Inner mt-membrane transporter]] •• [[O2k-Publications: Marker enzyme|Marker enzyme]] •• [[O2k-Publications: Supercomplex|Supercomplex]] •• [[O2k-Publications: TCA cycle and matrix dehydrogenases|TCA cycle and matrix dehydrogenases]] •• [[O2k-Publications: Uncoupling protein|Uncoupling protein]] | ||
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* [[O2k-Publications: Human - Heart|O2k-Publications: Human heart]] | * [[O2k-Publications: Human - Heart|O2k-Publications: Human heart]] | ||
* [[O2k-Publications: Skeletal muscle - human vs mouse]] | * [[O2k-Publications: Skeletal muscle - human vs mouse]] | ||
== O2k-Manuals and protocols and specific instrumental applications == | == O2k-Manuals and protocols and specific instrumental applications == | ||
Revision as of 14:50, 24 February 2015
O2k-Publications: Topics
See also >>> O2k-Publications - chronological: 4695
O2k-Publications in the MiPMap: selected fields of Oxygraph-2k applications
- mt-Medicine
- Exercise physiology;nutrition;life style •• Comparative MiP;environmental MiP
- Pharmacology;toxicology
- mt-Biogenesis;mt-density •• Genetic knockout;overexpression
- Instruments;methods
Pathological states
- Aging;senescence
- Alzheimer's
- Autism
- Cancer
- Cardiovascular
- COPD
- Diabetes
- Inherited •• Infectious
- Myopathy
- Neurodegenerative
- Obesity
- Parkinson's
- Sepsis
- Other
Stress conditions
- Cancer;apoptosis;cytochrome c •• Cell death •• Hypoxia •• Ischemia-reperfusion injury and preservation •• Permeability transition •• Oxidative stress;RONS •• Temperature •• Cell death •• Mitochondrial disease;degenerative disease and defect
Mammals and models, other organisms
- Human •• Pig •• Horse •• Bovines •• Cat •• Dog •• Rabbit •• Mouse •• Rat •• Guinea pig•• Other mammals
- Chicken •• Zebrafish •• Drosophila •• Caenorhabditis elegans •• Artemia •• Saccharomyces cerevisiae
- Comparative MiP •• Plants
- Further information
Tissues, cell types and cell lines
- Heart •• Skeletal muscle •• Nervous system •• Liver •• Kidney •• Lung; gill •• Fat •• Genital •• Endothelial;epithelial;mesothelial cell •• Islet cell;pancreas;thymus •• Blood cells
- CHO •• HEK •• HeLa •• Neuroblastoma •• Fibroblast •• HUVEC •• Macrophage-derived cell lines •• Lymphocyte •• Platelet •• Stem cells •• Other cell lines
Preparations
- Intact organism •• Intact organ •• Intact cells •• Permeabilized cells •• Permeabilized tissue •• Homogenate •• Isolated mitochondria •• SMP •• Chloroplasts •• Enzyme •• Oxidase and biochemical oxidation
Regulation
- Flux control •• Coupling efficiency;uncoupling •• Uncoupler •• Inhibitor •• Temperature •• Oxygen kinetics •• Substrate
Enzymes
- Adenine nucleotide translocase •• Complex I •• Complex II;succinate dehydrogenase •• Complex III •• Complex IV;cytochrome c oxidase •• Complex V;ATP synthase •• Complex V;ATP synthase •• Inner mt-membrane transporter •• Marker enzyme •• Supercomplex •• TCA cycle and matrix dehydrogenases •• Uncoupling protein
MiPMap combinations - examples
Examples for specific combinations are given for O2k-Publications:
- O2k-Publications: Human skeletal muscle
- O2k-Publications: Human heart
- O2k-Publications: Skeletal muscle - human vs mouse
