Difference between revisions of "Template:Keywords: Coupling control states and rates"
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'''<big>1. Mitochondrial and cellular respiratory rates in coupling-control states</big>''' | |||
[[Image:OXPHOS-coupled energy cycles.jpg|right|300px||link=Gnaiger 2020 BEC MitoPathways|OXPHOS-coupled energy cycles. Source: The Blue Book]] | [[Image:OXPHOS-coupled energy cycles.jpg|right|300px||link=Gnaiger 2020 BEC MitoPathways|OXPHOS-coupled energy cycles. Source: The Blue Book]] | ||
::::» [[Baseline state]] | ::::» [[Baseline state]] | ||
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::::» [[State 1]] —» [[State 2]] —» [[State 3]] —» [[State 4]] —» [[State 5]] | ::::» [[State 1]] —» [[State 2]] —» [[State 3]] —» [[State 4]] —» [[State 5]] | ||
'''<big>2. Flux control ratios related to coupling in mt-preparations and living cells</big>''' | |||
::::» [[Flux control ratio]] | ::::» [[Flux control ratio]] | ||
::::» [[Coupling-control ratio]] | ::::» [[Coupling-control ratio]] | ||
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'''<big>3. Net, excess, and reserve capacities of respiration</big>''' | |||
{| class="wikitable" | {| class="wikitable" | ||
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'''<big>4. Flux control efficiencies related to coupling-control ratios</big>''' | |||
::::» [[Flux control efficiency]] ''j<sub>Z-Y</sub>'' | ::::» [[Flux control efficiency]] ''j<sub>Z-Y</sub>'' | ||
::::» [[Background state]] | ::::» [[Background state]] | ||
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'''<big>5. General</big>''' | |||
::::» [[Basal respiration]] | ::::» [[Basal respiration]] | ||
::::» [[Cell ergometry]] | ::::» [[Cell ergometry]] | ||
Latest revision as of 11:53, 28 May 2022
1. Mitochondrial and cellular respiratory rates in coupling-control states
| Respiratory rate | Defining relations | Icon | |
|---|---|---|---|
| OXPHOS capacity | P = P´-Rox |  |
mt-preparations |
| ROUTINE respiration | R = R´-Rox |  |
living cells |
| ET capacity | E = E´-Rox |  |
» Level flow |
| » Noncoupled respiration - Uncoupler | |||
| LEAK respiration | L = L´-Rox |  |
» Static head |
| » LEAK state with ATP | |||
| » LEAK state with oligomycin | |||
| » LEAK state without adenylates | |||
| Residual oxygen consumption Rox | L = L´-Rox | 
|
2. Flux control ratios related to coupling in mt-preparations and living cells
| FCR | Definition | Icon | |
|---|---|---|---|
| L/P coupling-control ratio | L/P |  |
» Respiratory acceptor control ratio, RCR = P/L |
| L/R coupling-control ratio | L/R | 
| |
| L/E coupling-control ratio | L/E |  |
» Uncoupling-control ratio, UCR = E/L (ambiguous) |
| P/E control ratio | P/E | 
| |
| R/E control ratio | R/E |  |
» Uncoupling-control ratio, UCR = E/L |
| net P/E control ratio | (P-L)/E | 
| |
| net R/E control ratio | (R-L)/E | 
|
3. Net, excess, and reserve capacities of respiration
| Respiratory net rate | Definition | Icon |
|---|---|---|
| P-L net OXPHOS capacity | P-L | 
|
| R-L net ROUTINE capacity | R-L | 
|
| E-L net ET capacity | E-L | 
|
| E-P excess capacity | E-P | 
|
| E-R reserve capacity | E-R | 
|
4. Flux control efficiencies related to coupling-control ratios
| Coupling-control efficiency | Definition | Icon | Canonical term | ||
|---|---|---|---|---|---|
| P-L control efficiency | jP-L | = (P-L)/P | = 1-L/P |  |
P-L OXPHOS-flux control efficiency |
| R-L control efficiency | jR-L | = (R-L)/R | = 1-L/R |  |
R-L ROUTINE-flux control efficiency |
| E-L coupling efficiency | jE-L | = (E-L)/E | = 1-L/E |  |
E-L ET-coupling efficiency » Biochemical coupling efficiency |
| E-P control efficiency | jE-P | = (E-P)/E | = 1-P/E |  |
E-P ET-excess flux control efficiency |
| E-R control efficiency | jE-R | = (E-R)/E | = 1-R/E |  |
E-R ET-reserve flux control efficiency |
5. General
- » Basal respiration
- » Cell ergometry
- » Dyscoupled respiration
- » Dyscoupling
- » Electron leak
- » Electron-transfer-pathway state
- » Hyphenation
- » Oxidative phosphorylation
- » Oxygen flow
- » Oxygen flux
- » Permeabilized cells
- » Phosphorylation system
- » Proton leak
- » Proton slip
- » Respiratory state
- » Uncoupling
