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Difference between revisions of "O2k-Publications: Topics"

From Bioblast
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| {{#ask:[[Category:Publications]] [[Tissue and cell::Kidney]] |format=count}}  
| {{#ask:[[Category:Publications]] [[Tissue and cell::Kidney]] |format=count}}  
|-  
|-  
| 5
| [[O2k-Publications: Liver|Liver]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Liver]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Liver]] |format=count}}
|-
| 6
| [[O2k-Publications: Lung; gill|Lung;Gill]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Lung;gill]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Lung;gill]] |format=count}}
|-
| 7
| [[O2k-Publications: Nervous system|Nervous system]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Nervous system]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Nervous system]] |format=count}}
|-
| 8
| [[O2k-Publications: Skeletal muscle|Skeletal muscle]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Skeletal muscle]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Skeletal muscle]] |format=count}}
|- 
|}  
|}  


•• [[O2k-Publications: Liver|Liver]]
•• [[O2k-Publications: Lung; gill|Lung;Gill]]
•• [[O2k-Publications: Nervous system|Nervous system]]
•• [[O2k-Publications: Skeletal muscle|Skeletal muscle]]


:: '''Cell types''' - ''alphabetical order''
:: '''Cell types''' - ''alphabetical order''
•• [[O2k-Publications: Blood cells|Blood cells]]
::::{| class="wikitable sortable" style="text-align:center"
•• [[O2k-Publications: Endothelial; Epithelial; Mesothelial Cell|Endothelial;epithelial;mesothelial cell]]  
! #
•• [[O2k-Publications:  Fibroblast|Fibroblast]]  
! O2k-Publications
•• [[O2k-Publications: Islet Cell; Pancreas; Thymus|Islet cell;pancreas;thymus]]  
! MitoPedia:
•• [[O2k-Publications: Lymphocyte|Lymphocyte]]  
! Comment
•• [[O2k-Publications: Platelet|Platelet]]  
! O2k
•• [[O2k-Publications: Stem  cells|Stem cells]]  
! Total
|-
| 1
| [[O2k-Publications: Blood cells|Blood cells]]  
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Blood cells]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Blood cells]] |format=count}}
|-
| 2
| [[O2k-Publications: Endothelial; Epithelial; Mesothelial Cell|Endothelial;epithelial;mesothelial cell]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Endothelial;epithelial;mesothelial cell]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Endothelial;epithelial;mesothelial cell]] |format=count}}
|-
| 3
| [[O2k-Publications:  Fibroblast|Fibroblast]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Fibroblast]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Fibroblast]] |format=count}}
|-
| 4
| [[O2k-Publications: Islet Cell; Pancreas; Thymus|Islet cell;pancreas;thymus]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Islet cell;pancreas;thymus]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Islet cell;pancreas;thymus]] |format=count}}
|-
| 5
| [[O2k-Publications: Lymphocyte|Lymphocyte]]  
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Lymphocyte]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Lymphocyte]] |format=count}}
|-
| 6
| [[O2k-Publications: Platelet|Platelet]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Platelet]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Platelet]] |format=count}}
|-
| 7
| [[O2k-Publications: Stem  cells|Stem cells]]  
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Stem cells]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Stem cells]] |format=count}}
|-
|}
 


:: '''Cell lines''' - ''alphabetical order''
:: '''Cell lines''' - ''alphabetical order''
•• [[O2k-Publications: CHO|CHO]]  
::::{| class="wikitable sortable" style="text-align:center"
•• [[O2k-Publications: HEK|HEK]]  
! #
•• [[O2k-Publications: HeLa|HeLa]]  
! O2k-Publications
•• [[O2k-Publications:  Neuroblastoma|Neuroblastoma]]  
! MitoPedia:
•• [[O2k-Publications: HUVEC|HUVEC]]  
! Comment
•• [[O2k-Publications: Macrophage-derived cell lines|Macrophage-derived  cell lines]]  
! O2k
* [[O2k-Publications: Other cell lines|Other cells and cell lines]]
! Total
|-
| 1
| [[O2k-Publications: CHO|CHO]]  
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::CHO]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::CHO]] |format=count}}
|-
| 2
| [[O2k-Publications: HEK|HEK]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::HEK]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::HEK]] |format=count}}
|-
| 3
| [[O2k-Publications: HeLa|HeLa]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::HeLa]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::HeLa]] |format=count}}
|-
| 4
| [[O2k-Publications:  Neuroblastoma|Neuroblastoma]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Neuroblastoma]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Neuroblastoma]] |format=count}}
|-
| 5
| [[O2k-Publications: HUVEC|HUVEC]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::HUVEC]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::HUVEC]] |format=count}}
|-
| 6
| [[O2k-Publications: Macrophage-derived cell lines|Macrophage-derived cell lines]]
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and method::Oxygraph-2k]] [[Tissue and cell::Macrophage-derived]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Macrophage-derived]] |format=count}}
|-
| 7
| [[O2k-Publications: Other cell lines|Other cells and cell lines]]  
| style="text-align:left"|
| style="text-align:left"|
| {{#ask:[[Category:Publications]] [[Instrument and  method::Oxygraph-2k]] [[Tissue and cell::Other cell lines]] |format=count}}
| {{#ask:[[Category:Publications]] [[Tissue and cell::Other cell lines]] |format=count}}
|-
|}




Revision as of 10:45, 11 November 2016

                

O2k-Publications: Topics

Mitochondria and cell research
O2k-Publications: chronological
Publications in the MiPMap


See also » O2k-Publications - chronological: 4705


Mitochondrial physiology: MiP areas


Pathological states

Alphabetical order


Stress conditions

Alphabetical order


Organisms

Mammals
Model organisms
Non-mammals
  • Birds (» Chicken)
  • Reptiles - turtles, lizards, snakes, crocodiles, alligators
  • Amphibians - frogs, toads, salamanders
  • Fishes - bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); » Zebrafish
  • Hexapods - insects, springtails; » Drosophila
  • Crustaceans - crabs, shrimp, barnacles, etc.; » Artemia
  • Annelids - polychaetes, e.g. lugworm Arenicola marina, oligochaetes, leeches
  • Molluscs - gastropods, cephalopods, bivalves
  • Nematodes » Caenorhabditis elegans
  • Other invertebrates - urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ...
  • Fungi - yeast, molds, mushrooms, etc.; » Saccharomyces cerevisiae
  • Plants
  • Protists - amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc.
  • Eubacteria - true bacteria, cyanobacteria, spirochetes
  • Archaea - archaebacteria


Tissues and cells

Tissues - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Fat White, brown, beige fat tissue 188 263
2 Genital 92 123
3 Heart 723 935
4 Kidney 150 183
5 Liver 645 840
6 Lung;Gill 59 82
7 Nervous system 606 732
8 Skeletal muscle 1105 1369


Cell types - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 Blood cells 254 320
2 Endothelial;epithelial;mesothelial cell 259 294
3 Fibroblast 206 270
4 Islet cell;pancreas;thymus 55 67
5 Lymphocyte 58 76
6 Platelet 121 151
7 Stem cells 36 48


Cell lines - alphabetical order
# O2k-Publications MitoPedia: Comment O2k Total
1 CHO 14 16
2 HEK 95 116
3 HeLa 38 55
4 Neuroblastoma 42 49
5 HUVEC 19 22
6 Macrophage-derived cell lines 26 37
7 Other cells and cell lines 292 338


Preparations


Enzymes

Alphabetical order

•• Adenine nucleotide translocase •• Complex I •• Complex II;succinate dehydrogenase •• Complex III •• Complex IV;cytochrome c oxidase •• Complex V;ATP synthase •• Inner mt-membrane transporter •• Marker enzyme •• Supercomplex •• TCA cycle and matrix dehydrogenases •• Uncoupling protein


Regulation

Alphabetical order

•• ADP •• ATP production •• Aerobic glycolysis •• Amino acid •• Calcium •• Coupling efficiency;uncoupling •• Cyt c •• Fatty acid •• Flux control •• Inhibitor •• Ion;substrate transport •• mt-Membrane potential •• Oxygen kinetics •• Q-junction effect •• Redox state •• Substrate •• Temperature •• Threshold;excess capacity •• Uncoupler


Coupling control states

# O2k-Publications MitoPedia: Pathway control states Comment O2k Total
1 P OXPHOS OXPHOS capacity Oxidative phosphorylation capacity, saturating [ADP] 2864 3093
2 R ROUTINE ROUTINE respiration Physiological state, intact cells 892 979
3 E ETS Electron transfer system capacity Maximal noncoupled respiration 0 0
4 L LEAK LEAK respiration Resting state, non-phosphorylating respiration 2609 2768


Pathway control states

# O2k-Publications MitoPedia: Pathway control states Comment O2k Total
1 F F-pathway control state Fatty acid oxidation, level 5 608 752
2 N N-pathway control state NADH-linked, level 4 2473 2621
3 S S-pathway control state Succinate-linked, level 3 1684 1792
4 Gp Gp-pathway control state Glycerophosphate-linked, level 3 157 183
5 DQ Duorquinol-linked, level 2 26 31
6 CIV Complex IV single step Ascorbate & TMPD, level 1 702 730
7 NS NS-pathway control state Convergent CI- and CII-linked electron flow to the Q-junction 1579 1636
8 Other 132 148
9 ROX ROX Residual oxygen consumption includes non-mitochondrial respiration 1519 1571


MiPMap combinations - examples

Examples for specific combinations
Browse data


O2k-Manuals and protocols and specific instrumental applications

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