From Bioblast
Jump to navigation Jump to search
Bioblasts - Richard Altmann and MiPArt by Odra Noel
MitoPedia     Terms and abbreviations     Preprints and history     MiP and biochemistry     Concepts and methods     MitoPedia: SUIT     MitoPedia: O2k



Development of a consistent nomenclature in mitochondrial physiology, in the spirit of Gentle Science

High-resolution terminology - matching measurements at high-resolution

» MitoPedia alert

» MitoPedia: Terms and abbreviations - IUPAC guidelines are followed for general terms of physical chemistry[1],[2],[3], extended by concepts of mitochondrial physiology[4] and nonequilibrium thermodynamics[5].

MitoPedia: Concepts

» MitoPedia: MiP concepts
» MitoPedia: Respiratory states[4]
» MitoPedia: Respiratory control ratios[4]
» MitoPedia: SUIT
» MitoPedia: Ergodynamics
» MitoFit Quality Control System

MitoPedia: Methods

» MitoPedia: Respirometry
» MitoPedia: Fluorometry
» MitoPedia: Spectrophotometry

MitoPedia: O2k and high-resolution respirometry

» MitoPedia: O2k-Open Support
» MitoPedia: O2k hardware
» MitoPedia: DatLab
» MitoPedia: SUIT

MitoPedia: MiP and biochemistry

» MitoPedia: Substrates and metabolites
» MitoPedia: Uncouplers
» MitoPedia: Inhibitors
» MitoPedia: Sample preparations
» MitoPedia: Permeabilization agents
» MitoPedia: Media for respirometry
» MitoPedia: Enzymes[6]

MitoPedia: Preprints and history

» MitoPedia: Preprints - New: 2019-02-19
» Mitochondria and bioblasts: Made history

MitoPedia: Oroboros Ecosystem

» O2k-Protocols
» O2k-Publications: Topics

MitoPedia: Links

» List of Links - Mitochondria: Structure and Function
» Mitochondrial Global Network: List of MitoGlobal Societies

Bioblast wiki

MitoPedia and Bioblast

The term MitoPedia expresses the link to Wikipedia. We use the MediaWiki software for generating a bottom-up database and glossaries. The 'Bioblast community' of mitochondrial experts is cordially invited to active participation - a vision that may develop further in the future. To make this possible, the Oroboros-team continues to work on the Bioblast website as an information synthase - in the spirit of Gentle Science and as a branch of the Oroboros Ecosystem. ~ Gnaiger Erich 09:20, 18 May 2014 (CEST)

MitoPedia - high-resolution terminology, matching measurements at high-resolution

MitoPedia term: Dihydro-orotate dehydrogenase - another respiratory Complex at the Q-junction.

» Respiratory control ratios beyond the RCR - coupling:

P-L control efficiency P-L control efficiency,

R-L control efficiency R-L control efficiency,

E-L coupling efficiency E-L coupling efficiency.

MitoPathways 2020

MitoPathways - The Blue Book

» HRR - high-resolution respirometry was established in 1995. This is the first comprehensive methodological summary: Control of mitochondrial and cellular respiration by oxygen. J Bioenerg Biomembr (1995)


  1. Cohen ER, Cvitas T, Frey JG, Holmström B, Kuchitsu K, Marquardt R, Mills I, Pavese F, Quack M, Stohner J, Strauss HL, Takami M, Thor HL (2008) Quantities, Units and Symbols in Physical Chemistry, IUPAC Green Book, 3rd Edition, 2nd Printing, IUPAC & RSC Publishing, Cambridge. - »Bioblast link«
  2. International Union of Biochemistry and Molecular Biology: Recommendations for terminology and databases for biochemical thermodynamics. - »Open Access«
  3. International Union of Biochemistry (1981) Symbolism and terminology in enzyme kinetics. - »Open Access«
  4. 4.0 4.1 4.2 Gnaiger E (2014) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 4th ed. Mitochondr Physiol Network 19.12. Oroboros MiPNet Publications, Innsbruck:80 pp. - »Bioblast link«
  5. Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65:1983-2002. - »Bioblast link«
  6. International Union of Biochemistry (1991) Nomenclature of electron-transfer proteins. Biochim Biophys Acta 1060. - »Open Access«